CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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REL
(
Homo sapiens
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
ENSG00000162924
T317174_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
REL
M02710_2.00
Homo sapiens
BGGRNWTTCC
GGAAWNYCCV
SELEX
Mathelier et al.(2014)
MA0101.1
(Direct)
(Direct)
REL
M09350_2.00
Homo sapiens
TGKVMTTYCCCHDBH
DVHDGGGRAAKBMCA
Misc
Kulakovskiy et al.(2013)
REL_HUMAN.H11MO.0.B
(Direct)
(Direct)
REL
M11235_2.00
Homo sapiens
BGGRNWTTCC
GGAAWNYCCV
Transfac
Matys et al.(2006)
V$CREL_01
(Direct)
(Direct)
REL
M11236_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREL_Q6
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Rel
M09353_2.00
Mus musculus
TGKVMTTYCCCHDBH
DVHDGGGRAAKBMCA
Misc
Kulakovskiy et al.(2013)
REL_MOUSE.H11MO.0.A
0.935
0.935
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000295025
Rel
10
178
IEIIEQPRQRGMRFRYKCEGRSAGSIPGEHSTDNNRTYPSIQIMNYYGKGKVRITLVTKNDPYKPHPHDLVGKDCRDGYYEAEFGQERRPLFFQNLGIRCVKKKEVKEAIITRIKAGINPFNVPEKQLNDIEDCDLNVVRLCFQVFLPDEHGNLTTALPPVVSNPIYDN
ENSP00000377989
Rel
10
178
IEIIEQPRQRGMRFRYKCEGRSAGSIPGEHSTDNNRTYPSIQIMNYYGKGKVRITLVTKNDPYKPHPHDLVGKDCRDGYYEAEFGQERRPLFFQNLGIRCVKKKEVKEAIITRIKAGINPFNVPEKQLNDIEDCDLNVVRLCFQVFLPDEHGNLTTALPPVVSNPIYDN
Links
Other
Rel
family TFs
Other
Homo sapiens
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AACERI_AaceriAFR136C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAFR136C
I
0.000
AGOS_AFR136C
Ashbya gossypii
AGOS_AFR136C
I
0.000
AWRI1499_0492
Brettanomyces bruxellensis
AWRI1499_0492
N
0.000
BN7_3380
Wickerhamomyces ciferrii
BN7_3380
I
0.000
BN7_4359
Wickerhamomyces ciferrii
BN7_4359
N
0.000
CANTEDRAFT_132848
Candida tenuis
CANTEDRAFT_132848
I
0.000
CaO19.11452
Candida albicans
CaO19.11452
N
0.000
CaO19.3969
Candida albicans
CaO19.3969
N
0.000
CaO19.454
Candida albicans
CaO19.454
I
0.000
CaO19.8085
Candida albicans
CaO19.8085
I
0.000
CD36_31370
Candida dubliniensis
CD36_31370
N
0.000
CD36_54430
Candida dubliniensis
CD36_54430
N
0.000
CLUG_01812
Candida lusitaniae
CLUG_01812
N
0.000
CLUG_01812
Clavispora lusitaniae
CLUG_01812
N
0.000
CLUG_03610
Candida lusitaniae
CLUG_03610
I
0.000
CLUG_03610
Clavispora lusitaniae
CLUG_03610
I
0.000
CORT_0F01150
Candida orthopsilosis
CORT_0F01150
N
0.000
CPAG_02000
Candida parapsilosis
CPAG_02000
N
0.000
CTRG_00655
Candida tropicalis
CTRG_00655
I
0.000
CTRG_06093
Candida tropicalis
CTRG_06093
I
0.000
DEHA2G10560g
Debaryomyces hansenii
DEHA2G10560g
I
0.000
DEHA2G20636g
Debaryomyces hansenii
DEHA2G20636g
I
0.000
Ecym_2312
Eremothecium cymbalariae
Ecym_2312
I
0.000
estExt_fgenesh1_pg.C_chr_2.10346
Pichia stipitis
estExt_fgenesh1_pg.C_chr_2.10346
N
0.000
estExt_fgenesh1_pg.C_chr_6.10474
Pichia stipitis
estExt_fgenesh1_pg.C_chr_6.10474
I
0.000
G210_0510
Candida maltosa
G210_0510
I
0.000
GNLVRS01_PISO0A02134g
Millerozyma farinosa
GNLVRS01_PISO0A02134g
N
0.000
GNLVRS01_PISO0B02289g
Millerozyma farinosa
GNLVRS01_PISO0B02289g
N
0.000
GNLVRS01_PISO0E07748g
Millerozyma farinosa
GNLVRS01_PISO0E07748g
I
0.000
GNLVRS01_PISO0F09091g
Millerozyma farinosa
GNLVRS01_PISO0F09091g
I
0.000
HPODL_00777
Ogataea parapolymorpha
HPODL_00777
I
0.000
JL09_g3802
Pichia kudriavzevii
JL09_g3802
N
0.000
KLTH0F14982g
Lachancea thermotolerans
KLTH0F14982g
I
0.000
KLTH0F14982g
Kluyveromyces thermotolerans
KLTH0F14982g
I
0.000
KNAG_0K00470
Kazachstania naganishii
KNAG_0K00470
N
0.000
KUCA_T00005514001
Kuraishia capsulata
KUCA_T00005514001
N
0.000
Kwal_21254
Kluyveromyces waltii
Kwal_21254
I
0.000
LELG_03188
Lodderomyces elongisporus
LELG_03188
N
0.000
LELG_04038
Lodderomyces elongisporus
LELG_04038
N
0.000
MYCTH_2312138
Myceliophthora thermophila
MYCTH_2312138
N
0.000
PAS_chr2-1_0404
Komagataella pastoris
PAS_chr2-1_0404
N
0.000
PGUG_03027
Candida guilliermondii
PGUG_03027
N
0.000
PGUG_03027
Meyerozyma guilliermondii
PGUG_03027
N
0.000
PICST_66881
Scheffersomyces stipitis
PICST_66881
N
0.000
PICST_68146
Scheffersomyces stipitis
PICST_68146
I
0.000
SAKL0G03586g
Lachancea kluyveri
SAKL0G03586g
I
0.000
TPHA_0H01130
Tetrapisispora phaffii
TPHA_0H01130
I
0.000
XP_002491305.1
Pichia pastoris
XP_002491305.1
N
0.000