Pvit_13855 (Pogona vitticeps)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 Pvit_13855 T317819_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nfkb2
M09356_2.00 		Mus musculus
GGGRHTTYCCC
GGGRAADYCCC		 Misc
Kulakovskiy et al.(2013)
NFKB2_MOUSE.H11MO.0.C 		0.805 0.805
NFKB2
M03446_2.00 		Homo sapiens
NGGGGAWTCCCCB
VGGGGAWTCCCCN		 SELEX
Jolma et al.(2013)
NFKB2_1 		0.799 0.799
NFKB2
M05699_2.00 		Homo sapiens
HGGKRNWTCCCCN
NGGGGAWNYMCCD		 SELEX
Yin et al.(2017)
NFKB2_eDBD_HT-SELEX 		0.799 0.799
NFKB2
M09344_2.00 		Homo sapiens
GGGRHTTYCCC
GGGRAADYCCC		 Misc
Kulakovskiy et al.(2013)
NFKB2_HUMAN.H11MO.0.B 		0.799 0.799
NFKB2
M05700_2.00 		Homo sapiens
HGGKRNWTYCCCN
NGGGRAWNYMCCD		 SELEX
Yin et al.(2017)
NFKB2_eDBD_Methyl-HT-SELEX 		0.799 0.799
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_13855 Rel 40 220

Links

Other Rel family TFs
Other Pogona vitticeps TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R011824 Calypte anna Aan_R011824 I 0.834
Afo_R002575 Aptenodytes forsteri Afo_R002575 I 0.840
Alligator_sinensis_CCG009270.1 Alligator sinensis Alligator_sinensis_CCG009270.1 I 0.858
Brh_R009664 Buceros rhinoceros Brh_R009664 I 0.852
Cmyd_10006544 Chelonia mydas Cmyd_10006544 I 0.840
ENSAMEG00000017735 Ailuropoda melanoleuca ENSAMEG00000017735 I 0.805
ENSAPLG00000013409 Anas platyrhynchos ENSAPLG00000013409 I 0.834
ENSBTAP00000007904-D1 Bos grunniens ENSBTAP00000007904-D1 I 0.805
ENSCSAG00000005442 Chlorocebus sabaeus ENSCSAG00000005442 I 0.799
ENSFALG00000007271 Ficedula albicollis ENSFALG00000007271 I 0.840
ENSMEUG00000011176 Macropus eugenii ENSMEUG00000011176 I 0.799
ENSMGAG00000007084 Meleagris gallopavo ENSMGAG00000007084 I 0.846
ENSMPUG00000016882 Mustela putorius furo ENSMPUG00000016882 I 0.805
ENSNLEG00000015079 Nomascus leucogenys ENSNLEG00000015079 I 0.799
ENSOANG00000028755 Ornithorhynchus anatinus ENSOANG00000028755 I 0.787
ENSOANG00000030023 Ornithorhynchus anatinus ENSOANG00000030023 I 0.755
ENSOARG00000000483 Ovis aries ENSOARG00000000483 I 0.805
ENSP00000189444 Macaca fascicularis ENSP00000189444 I 0.791
ENSPANG00000021013 Papio anubis ENSPANG00000021013 I 0.799
ENSPPYG00000002599 Pongo abelii ENSPPYG00000002599 I 0.799
ENSSHAG00000018852 Sarcophilus harrisii ENSSHAG00000018852 I 0.805
ENSSTOG00000002191 Ictidomys tridecemlineatus ENSSTOG00000002191 I 0.805
Gfo_R002459 Geospiza fortis Gfo_R002459 I 0.840
Myotis_brandtii_NFKB2_10025917 Myotis brandtii Myotis_brandtii_NFKB2_10025917 I 0.805
NFKB1 Sus scrofa ENSSSCG00000030957 I 0.833
Nfkb2 Dipodomys ordii ENSDORG00000013409 I 0.811
NFKB2 Sus scrofa ENSSSCG00000010580 I 0.805
NFKB2 Taeniopygia guttata ENSTGUG00000007491 I 0.840
NFKB2 Tursiops truncatus ENSTTRG00000008357 I 0.724
NFKB2 Loxodonta africana ENSLAFG00000006805 I 0.799
NFKB2 Dasypus novemcinctus ENSDNOG00000032784 I 0.805
NFKB2 Cavia porcellus ENSCPOG00000004847 I 0.805
NFKB2 Callithrix jacchus ENSCJAG00000017928 I 0.805
NFKB2 Canis familiaris ENSCAFG00000010155 I 0.805
NFKB2 Bos taurus ENSBTAG00000006017 I 0.805
nfkb2 Xenopus tropicalis XB-GENE-970084 I 0.769
Nfkb2 Rattus norvegicus ENSRNOG00000019311 I 0.805
NFKB2 Gorilla gorilla ENSGGOG00000006971 I 0.799
NFKB2 Gallus gallus ENSGALG00000005653 I 0.846
NFKB2 Homo sapiens ENSG00000077150 D 0.931
NFKB2 Microcebus murinus ENSMICG00000011856 I 0.811
NFKB2 Myotis lucifugus ENSMLUG00000006287 I 0.805
NFKB2 Macaca mulatta ENSMMUG00000002990 I 0.799
NFKB2 Felis catus ENSFCAG00000001242 I 0.805
Nfkb2 Mus musculus ENSMUSG00000025225 D 0.805
NFKB2 Echinops telfairi ENSETEG00000002347 I 0.756
NFKB2 Equus caballus ENSECAG00000019593 I 0.805
NFKB2 Anolis carolinensis ENSACAG00000014215 I 0.923
NFKB2 Oryctolagus cuniculus ENSOCUG00000005735 I 0.811
NFKB2 Otolemur garnettii ENSOGAG00000016379 I 0.805
NFKB2 Procavia capensis ENSPCAG00000011503 I 0.799
NFKB2 Pan troglodytes ENSPTRG00000002888 I 0.799
NFKB2 Sorex araneus ENSSARG00000006180 I 0.730
nfkb2.S Xenopus laevis XB-GENE-970090 N 0.763
Ogr18048 Ophisaurus gracilis Ogr18048 I 0.899