FOMPIDRAFT_1038544 (Fomitopsis pinicola)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 FOMPIDRAFT_1038544 T318609_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RFX1
M00066_2.00 		Saccharomyces cerevisiae
NSGTTGCYAN
NTRGCAACSN		 PBM
Badis et al.(2008)
RFX1_4537 		0.651 0.430
RFX1
M07494_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0365.1 		0.651 0.430
RFX1
M08600_2.00 		Saccharomyces cerevisiae
CGTYRBYAYRGYWACM
KGTWRCYRTRVYRACG		 Misc
DeBoer et al.(2011)
YLR176C_1478 		0.651 0.430
RFX1
M08601_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 Misc
DeBoer et al.(2011)
YLR176C_496 		0.651 0.430
RFX1
M11251_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$RFX1_02 		0.651 0.430
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EPS95356 RFX 215 293

Links

Other RFX family TFs
Other Fomitopsis pinicola TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
14959_Multiple Saccharomyces mikatae 14959_Multiple I 0.654
16177_Multiple Saccharomyces paradoxus 16177_Multiple I 0.651
A1Q1_00828 Trichosporon asahii A1Q1_00828 I 0.671
AACERI_AaceriAAL010W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL010W I 0.654
ACLA_009440 Aspergillus clavatus CADACLAG00001004 I 0.651
ACRE_029400 Acremonium chrysogenum ACRE_029400 I 0.654
AFUA_5G06120 Aspergillus fumigatus CADAFUAG00006202 I 0.651
AGABI2DRAFT_184602 Agaricus bisporus AGABI2DRAFT_184602 I 0.788
AGOS_AAL010W Ashbya gossypii AGOS_AAL010W I 0.654
ANIA_02296 Aspergillus nidulans CADANIAG00008989 I 0.651
ATEG_09416 Aspergillus terreus CADATEAG00008983 I 0.651
BAUCODRAFT_23427 Baudoinia compniacensis BAUCODRAFT_23427 I 0.652
BDDG_02784 Blastomyces dermatitidis BDDG_02784 I 0.654
BN946_scf184858.g55 Trametes cinnabarina BN946_scf184858.g55 I 0.785
BOTBODRAFT_100719 Botryobasidium botryosum BOTBODRAFT_100719 N 0.780
CADAFLAG00010851 Aspergillus flavus CADAFLAG00010851 I 0.651
CADANGAG00013568 Aspergillus niger CADANGAG00013568 I 0.651
CADAORAG00004061 Aspergillus oryzae CADAORAG00004061 I 0.651
CAGL0B04895g Candida glabrata CAGL0B04895g I 0.652
CAGL0H03751g Candida glabrata CAGL0H03751g I 0.657
CC1G_00311 Coprinopsis cinerea CC1G_00311 I 0.780
CERSUDRAFT_149026 Ceriporiopsis subvermispora CERSUDRAFT_149026 I 0.783
CY34DRAFT_103779 Suillus luteus CY34DRAFT_103779 I 0.788
DACRYDRAFT_45233 Dacryopinax sp DACRYDRAFT_45233 I 0.757
DICSQDRAFT_106385 Dichomitus squalens DICSQDRAFT_106385 I 0.785
DOTSEDRAFT_132769 Dothistroma septosporum DOTSEDRAFT_132769 I 0.653
E5Q_03025 Mixia osmundae E5Q_03025 I 0.695
E5Q_03026 Mixia osmundae E5Q_03026 I 0.695
estExt_fgenesh1_pg.C_chr_80140 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_80140 I 0.657
EuGene4000430 Heterobasidion annosum EuGene4000430 I 0.788
EURHEDRAFT_516724 Aspergillus ruber EURHEDRAFT_516724 I 0.651
EVEC_0001085201 Enterobius vermicularis EVEC_0001085201 I 0.655
fgenesh1_pg.00162_#_176 Aspergillus carbonarius fgenesh1_pg.00162_#_176 I 0.651
fgenesh1_pg.C_scaffold_2000774 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_2000774 I 0.788
fgeneshTM_pg.2_#_559 Tremella mesenterica fgeneshTM_pg.2_#_559 I 0.694
FIBRA_04592 Fibroporia radiculosa FIBRA_04592 I 0.781
GALMADRAFT_236082 Galerina marginata GALMADRAFT_236082 I 0.788
GLOTRDRAFT_32962 Gloeophyllum trabeum GLOTRDRAFT_32962 I 0.787
GNLVRS01_PISO0E08012g Millerozyma farinosa GNLVRS01_PISO0E08012g I 0.651
GNLVRS01_PISO0F09355g Millerozyma farinosa GNLVRS01_PISO0F09355g I 0.651
GPLIN_000191300 Globodera pallida GPLIN_000191300 I 0.665
GSTUM_00005211001 Tuber melanosporum GSTUM_00005211001 I 0.661
gw1.15.255.1 Mycosphaerella fijiensis gw1.15.255.1 I 0.653
HCBG_05483 Histoplasma capsulatum HCBG_05483 I 0.652
HelroG82191 Helobdella robusta HelroG82191 I 0.653
HETIRDRAFT_170415 Heterobasidion irregulare HETIRDRAFT_170415 I 0.788
JAAARDRAFT_166855 Jaapia argillacea JAAARDRAFT_166855 I 0.787
K443DRAFT_673983 Laccaria amethystina K443DRAFT_673983 I 0.788
LACBIDRAFT_311799 Laccaria bicolor LACBIDRAFT_311799 I 0.788
LALA0_S03e09428g Lachancea lanzarotensis LALA0_S03e09428g I 0.651
M378DRAFT_67300 Amanita muscaria M378DRAFT_67300 I 0.788
M404DRAFT_124798 Pisolithus tinctorius M404DRAFT_124798 I 0.786
M407DRAFT_70388 Tulasnella calospora M407DRAFT_70388 I 0.780
M408DRAFT_113587 Serendipita vermifera M408DRAFT_113587 N 0.763
M413DRAFT_306124 Hebeloma cylindrosporum M413DRAFT_306124 I 0.788
Moror_7356 Moniliophthora roreri Moror_7356 N 0.783
MVLG_04348 Microbotryum violaceum MVLG_04348 I 0.682
MYCFIDRAFT_10959 Pseudocercospora fijiensis MYCFIDRAFT_10959 I 0.653
Mycgr3G110369 Zymoseptoria tritici Mycgr3G110369 I 0.657
NEPG_00460 Nematocida parisii ertm1 NEPG_00460 I 0.661
NERG_01713 Nematocida sp NERG_01713 I 0.664
NFIA_036980 Neosartorya fischeri CADNFIAG00003299 I 0.651
O9G_004738 Rozella allomycis O9G_004738 I 0.664
PAAG_00480 Paracoccidioides sp lutzii PAAG_00480 I 0.651
PABG_06744 Paracoccidioides brasiliensis PABG_06744 I 0.651
PAS_chr2-2_0153 Komagataella pastoris PAS_chr2-2_0153 I 0.652
PAXRUDRAFT_31952 Paxillus rubicundulus PAXRUDRAFT_31952 I 0.783
PDE_02161 Penicillium oxalicum PDE_02161 I 0.650
PGTG_11391 Puccinia graminis PGTG_11391 I 0.728
PHACADRAFT_25186 Phanerochaete carnosa PHACADRAFT_25186 I 0.788
PHLGIDRAFT_115381 Phlebiopsis gigantea PHLGIDRAFT_115381 I 0.788
PIIN_08876 Piriformospora indica PIIN_08876 N 0.768
PILCRDRAFT_94503 Piloderma croceum PILCRDRAFT_94503 I 0.788
PISMIDRAFT_670796 Pisolithus microcarpus PISMIDRAFT_670796 I 0.786
PLEOSDRAFT_1038101 Pleurotus ostreatus PLEOSDRAFT_1038101 I 0.784
PMAA_084960 Talaromyces marneffei PMAA_084960 I 0.651
PMAA_084960 Penicillium marneffei PMAA_084960 I 0.651
PNEG_02893 Pneumocystis murina PNEG_02893 I 0.662
PredSwiss_ASS2010_3110.1 Pneumocystis carinii PredSwiss_ASS2010_3110.1 I 0.662
PredSwiss_CON653.4 Pneumocystis carinii PredSwiss_CON653.4 I 0.662
PTSG_10225 Salpingoeca rosetta PTSG_10225 I 0.651
PTTG_01668 Puccinia triticina PTTG_01668 I 0.710
PVAR5_6603 Byssochlamys spectabilis PVAR5_6603 I 0.652
RFX1 Saccharomyces cerevisiae YLR176C D 0.651
sak1 Schizosaccharomyces pombe SPAC3G9.14 I 0.657
SAKL0D08734g Lachancea kluyveri SAKL0D08734g I 0.654
SCHCODRAFT_71685 Schizophyllum commune SCHCODRAFT_71685 I 0.788
SCLCIDRAFT_138144 Scleroderma citrinum SCLCIDRAFT_138144 I 0.786
SEPMUDRAFT_46603 Sphaerulina musiva SEPMUDRAFT_46603 I 0.651
SERLA73DRAFT_85891 Serpula lacrymans SERLA73DRAFT_85891 I 0.788
SJAG_04839 Schizosaccharomyces japonicus SJAG_04839 I 0.657
SMUV_0001085601 Syphacia muris SMUV_0001085601 I 0.656
SOCG_01623 Schizosaccharomyces octosporus SOCG_01623 I 0.651
SPPG_01648 Spizellomyces punctatus SPPG_01648 I 0.674
TDEL_0B05980 Torulaspora delbrueckii TDEL_0B05980 I 0.653
tetur19g03130 Tetranychus urticae tetur19g03130 I 0.653
TSTA_119980 Talaromyces stipitatus TSTA_119980 I 0.651
V565_046180 Rhizoctonia solani V565_046180 N 0.774
XP_002492053.1 Pichia pastoris XP_002492053.1 I 0.652
YALI0_E13596g Yarrowia lipolytica YALI0_E13596g I 0.654
ZBAI_03427 Zygosaccharomyces bailii ZBAI_03427 I 0.652
ZBAI_08430 Zygosaccharomyces bailii ZBAI_08430 I 0.652
ZYRO0E04642g Zygosaccharomyces rouxii ZYRO0E04642g I 0.655