G647_04815 (Cladophialophora carrionii)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 G647_04815 T318616_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RFX1
M00066_2.00 		Saccharomyces cerevisiae
NSGTTGCYAN
NTRGCAACSN		 PBM
Badis et al.(2008)
RFX1_4537 		0.678 0.468
RFX1
M07494_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0365.1 		0.678 0.468
RFX1
M08600_2.00 		Saccharomyces cerevisiae
CGTYRBYAYRGYWACM
KGTWRCYRTRVYRACG		 Misc
DeBoer et al.(2011)
YLR176C_1478 		0.678 0.468
RFX1
M08601_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 Misc
DeBoer et al.(2011)
YLR176C_496 		0.678 0.468
RFX1
M11251_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$RFX1_02 		0.678 0.468
daf-19
M00709_2.00 		Caenorhabditis elegans
SGTTRCTADG
CHTAGYAACS		 PBM
Narasimhan et al.(2015)
pTH10021 		0.652 0.403
RFX2
M02449_2.00 		Homo sapiens
BGTHRYYADG
CHTRRYDACV		 PBM
Weirauch et al.(2014)
pTH9194 		0.650 0.364
RFX2
M02450_2.00 		Ornithorhynchus anatinus
NGTHRYYANV
BNTRRYDACN		 PBM
Weirauch et al.(2014)
pTH9269 		0.650 0.364
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ETI23019 RFX 231 307

Links

Other RFX family TFs
Other Cladophialophora carrionii TFs

277 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP25962 Atta cephalotes ACEP25962 N 0.000
Alligator_sinensis_CCG004973.1 Alligator sinensis Alligator_sinensis_CCG004973.1 N 0.000
ARID2 Loxodonta africana ENSLAFG00000004415 N 0.000
ARID2 Vicugna pacos ENSVPAG00000004779 N 0.000
ARID2 Canis familiaris ENSCAFG00000009335 N 0.000
ARID2 Sorex araneus ENSSARG00000007415 N 0.000
ARID2 Pteropus vampyrus ENSPVAG00000009834 N 0.000
ARID2 Monodelphis domestica ENSMODG00000018527 N 0.000
ARID2 Macaca mulatta ENSMMUG00000015962 N 0.000
ARID2 Myotis lucifugus ENSMLUG00000006908 N 0.000
ARID2 Microcebus murinus ENSMICG00000001487 N 0.000
ARID2 Equus caballus ENSECAG00000019032 N 0.000
ARID2 Dasypus novemcinctus ENSDNOG00000014939 N 0.000
ARID2 Felis catus ENSFCAG00000012831 N 0.000
ARID2 Bos taurus ENSBTAG00000011087 N 0.000
ARID2 Homo sapiens ENSG00000189079 N 0.000
ARID2 Otolemur garnettii ENSOGAG00000024418 N 0.000
ARID2 Oryctolagus cuniculus ENSOCUG00000013306 N 0.000
CapteG183181 Capitella teleta CapteG183181 I 0.000
Cflo_11031--XP_001120115.1_APIME Camponotus floridanus Cflo_11031--XP_001120115.1_APIME N 0.000
CLEC001081 Cimex lectularius CLEC001081 N 0.000
Cmyd_10012613 Chelonia mydas Cmyd_10012613 N 0.000
DAPPUDRAFT_42744 Daphnia pulex DAPPUDRAFT_42744 I 0.000
ENSCING00000006777 Ciona intestinalis ENSCING00000006777 N 0.000
ENSCSAG00000006749 Chlorocebus sabaeus ENSCSAG00000006749 N 0.000
ENSLACG00000005013 Latimeria chalumnae ENSLACG00000005013 N 0.000
ENSMMUP00000020998 Macaca fascicularis ENSMMUP00000020998 N 0.000
ENSOANG00000010834 Ornithorhynchus anatinus ENSOANG00000010834 N 0.000
ENSP00000335044-D1 Bos grunniens ENSP00000335044-D1 N 0.000
ENSPANG00000015334 Papio anubis ENSPANG00000015334 N 0.000
ENSSSCG00000030685 Sus scrofa ENSSSCG00000030685 N 0.000
ENSXMAG00000006636 Xiphophorus maculatus ENSXMAG00000006636 N 0.000
fgenesh2_pg.scaffold_503000011 Branchiostoma floridae fgenesh2_pg.scaffold_503000011 I 0.000
GL20261 Drosophila persimilis FBgn0157856 I 0.000
ISCW014107 Ixodes scapularis ISCW014107 N 0.000
LotgiG113173 Lottia gigantea LotgiG113173 I 0.000
MDOA004973 Musca domestica MDOA004973 I 0.000
Minc08233 Meloidogyne incognita Minc08233 I 0.000
Myotis_brandtii_ARID2_10029493 Myotis brandtii Myotis_brandtii_ARID2_10029493 N 0.000
Ocbimv22031898m.g Octopus bimaculoides Ocbimv22031898m.g N 0.000
PHUM060660 Pediculus humanus PHUM060660 N 0.000
PTSG_10225 Salpingoeca rosetta PTSG_10225 I 0.000
RSKR_0000997500 Rhabditophanes kr3021 RSKR_0000997500 N 0.000
Sakowv30024145m.g Saccoglossus kowalevskii Sakowv30024145m.g N 0.000
SINV17530 Solenopsis invicta SINV17530 N 0.000
SPU_026159 Strongylocentrotus purpuratus SPU_026159 N 0.000
Tal_R007164 Tyto alba Tal_R007164 N 0.000
YQE_11990 Dendroctonus ponderosae YQE_11990 N 0.000