KLLA0_D04862g (Kluyveromyces lactis)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 KLLA0_D04862g T318657_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RFX1
M00066_2.00 		Saccharomyces cerevisiae
NSGTTGCYAN
NTRGCAACSN		 PBM
Badis et al.(2008)
RFX1_4537 		0.662 0.401
RFX1
M07494_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0365.1 		0.662 0.401
RFX1
M08600_2.00 		Saccharomyces cerevisiae
CGTYRBYAYRGYWACM
KGTWRCYRTRVYRACG		 Misc
DeBoer et al.(2011)
YLR176C_1478 		0.662 0.401
RFX1
M08601_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 Misc
DeBoer et al.(2011)
YLR176C_496 		0.662 0.401
RFX1
M11251_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$RFX1_02 		0.662 0.401
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CAH00372 RFX 310 388
CAH00372 RFX 616 685

Links

Other RFX family TFs
Other Kluyveromyces lactis TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
14959_Multiple Saccharomyces mikatae 14959_Multiple I 0.662
16177_Multiple Saccharomyces paradoxus 16177_Multiple I 0.662
AACERI_AaceriAAL010W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL010W I 0.672
AGOS_AAL010W Ashbya gossypii AGOS_AAL010W I 0.672
CAGL0B04895g Candida glabrata CAGL0B04895g I 0.659
CAGL0H03751g Candida glabrata CAGL0H03751g I 0.662
KAFR_0I02180 Kazachstania africana KAFR_0I02180 I 0.662
KLTH0H12144g Lachancea thermotolerans KLTH0H12144g I 0.664
KLTH0H12144g Kluyveromyces thermotolerans KLTH0H12144g I 0.664
KNAG_0I01300 Kazachstania naganishii KNAG_0I01300 I 0.662
Kpol_457p14 Vanderwaltozyma polyspora Kpol_457p14 I 0.662
Kwal_214 Kluyveromyces waltii Kwal_214 I 0.664
LALA0_S03e09428g Lachancea lanzarotensis LALA0_S03e09428g I 0.664
NCAS_0C04880 Naumovozyma castellii NCAS_0C04880 I 0.662
NDAI_0G04240 Naumovozyma dairenensis NDAI_0G04240 I 0.663
RFX1 Saccharomyces cerevisiae YLR176C D 0.662
SAKL0D08734g Lachancea kluyveri SAKL0D08734g I 0.671
Scas_Contig488.2 Saccharomyces castellii Scas_Contig488.2 I 0.662
TBLA_0C01490 Tetrapisispora blattae TBLA_0C01490 I 0.663
TDEL_0B05980 Torulaspora delbrueckii TDEL_0B05980 I 0.670
TPHA_0B03750 Tetrapisispora phaffii TPHA_0B03750 I 0.666
ZBAI_03427 Zygosaccharomyces bailii ZBAI_03427 I 0.664
ZBAI_08430 Zygosaccharomyces bailii ZBAI_08430 I 0.664
ZYRO0E04642g Zygosaccharomyces rouxii ZYRO0E04642g I 0.665