MTR_3g435550 (Medicago truncatula)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 MTR_3g435550 T320545_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RKD2
M07249_2.00 		Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN
NDRGAAGHYGAANVGWCDN		 Dap-seq
OMalley et al.(2016)
RKD2_col_a 		0.776 0.776
RKD2
M07250_2.00 		Arabidopsis thaliana
GWCBBTTCRDMTTCC
GGAAKHYGAAVVGWC		 Dap-seq
OMalley et al.(2016)
RKD2_colamp_a 		0.776 0.776
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH33319 RWP-RK 58 106

Links

Other RWP-RK family TFs
Other Medicago truncatula TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo2g100340 Brassica oleracea Bo2g100340 N
Bostr.16335s0035 Boechera stricta Bostr.16335s0035 N
Bra018563 Brassica rapa Bra018563 N
cassava26969.m1 Manihot esculenta cassava26969.m1 N
Ciclev10019662m.g Citrus clementina Ciclev10019662m.g N
Cla015352 Citrullus lanatus Cla015352 N
GLYMA03G37521 Glycine max GLYMA03G37521 N
Lus10013421.g Linum usitatissimum Lus10013421.g N
orange1.1g009421m.g Citrus sinensis orange1.1g009421m.g N
TCM_004738 Theobroma cacao TCM_004738 N
VIT_07s0005g00970 Vitis vinifera VIT_07s0005g00970 N