cassava34339.m1 (Manihot esculenta)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 cassava34339.m1 T320944_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava34339.m1 RWP-RK 19 67

Links

Other RWP-RK family TFs
Other Manihot esculenta TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30024.m001687 Ricinus communis 30024.m001687 N 0.898
AMTR_s00057p00091350 Amborella trichopoda AMTR_s00057p00091350 I 0.757
Bo2g046220 Brassica oleracea Bo2g046220 N 0.755
Bo9g108730 Brassica oleracea Bo9g108730 N 0.776
Bostr.26833s0978 Boechera stricta Bostr.26833s0978 N 0.776
Bra003088 Brassica rapa Bra003088 N 0.776
Bra022622 Brassica rapa Bra022622 N 0.755
Cagra.0084s0050 Capsella grandiflora Cagra.0084s0050 N 0.755
Carubv10028317m.g Capsella rubella Carubv10028317m.g N 0.755
cassava39076.m1 Manihot esculenta cassava39076.m1 N 0.857
chr1.CM0033.320.nc Lotus japonicus chr1.CM0033.320.nc N 0.735
Cla004331 Citrullus lanatus Cla004331 N 0.714
evm.TU.supercontig_3.98 Carica papaya evm.TU.supercontig_3.98 N 0.837
fgenesh1_pm.C_scaffold_8001005 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001005 N 0.735
gene12898-v1.0-hybrid Fragaria vesca gene12898-v1.0-hybrid N 0.735
GLYMA06G13530 Glycine max GLYMA06G13530 N 0.714
GLYMA06G13540 Glycine max GLYMA06G13540 N 0.714
Gorai.003G121600 Gossypium raimondii Gorai.003G121600 N 0.796
GSMUA_Achr4G08610_001 Musa acuminata GSMUA_Achr4G08610_001 N 0.714
GSMUA_AchrUn_randomG11290_001 Musa acuminata GSMUA_AchrUn_randomG11290_001 N 0.735
Lus10005921.g Linum usitatissimum Lus10005921.g N 0.776
MDP0000141137 Malus domestica MDP0000141137 N 0.816
MDP0000819497 Malus domestica MDP0000819497 N 0.776
mgf025545m Mimulus guttatus mgf025545m N 0.796
MLOC_12609 Hordeum vulgare MLOC_12609 I 0.703
PGSC0003DMG400018531 Solanum tuberosum PGSC0003DMG400018531 N 0.776
Pm019768 Prunus mume Pm019768 N 0.755
POPTR_0012s02390 Populus trichocarpa POPTR_0012s02390 N 0.816
POPTR_0015s01410 Populus trichocarpa POPTR_0015s01410 N 0.816
PRUPE_ppa015130mg Prunus persica PRUPE_ppa015130mg N 0.755
RKD4 Arabidopsis thaliana AT5G53040 N 0.755
SapurV1A.0250s0360 Salix purpurea SapurV1A.0250s0360 N 0.837
SapurV1A.0498s0250 Salix purpurea SapurV1A.0498s0250 N 0.837
Solyc03g083040.1 Solanum lycopersicum Solyc03g083040.1 N 0.776
TCM_015430 Theobroma cacao TCM_015430 N 0.837
Thhalv10015321m.g Eutrema salsugineum Thhalv10015321m.g N 0.755
VIT_16s0098g01730 Vitis vinifera VIT_16s0098g01730 N 0.755