MTR_7g100890 (Medicago truncatula)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04689 (S1FA) IPR006779 MTR_7g100890 T321394_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
S1FA3
M07252_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT3G09735_col_a 		0.758 0.758
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES81816 S1FA 432 497

Links

Other S1FA family TFs
Other Medicago truncatula TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo1g072490 Brassica oleracea Bo1g072490 N
Bostr.18473s0162 Boechera stricta Bostr.18473s0162 N
Bra018102 Brassica rapa Bra018102 N
Cagra.13768s0012 Capsella grandiflora Cagra.13768s0012 N
Carubv10018376m.g Capsella rubella Carubv10018376m.g N
evm.TU.supercontig_17.185 Carica papaya evm.TU.supercontig_17.185 N
GSMUA_Achr5G15570_001 Musa acuminata GSMUA_Achr5G15570_001 N
LBD27 Arabidopsis thaliana AT3G47870 N
SCP Arabidopsis lyrata fgenesh1_pg.C_scaffold_5001275 N
Thhalv10011007m.g Eutrema salsugineum Thhalv10011007m.g N