OBART04G11650 (Oryza barthii)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04689 (S1FA) IPR006779 OBART04G11650 T321399_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART04G11650.1 S1FA 46 111
OBART04G11650.2 S1FA 15 80

Links

Other S1FA family TFs
Other Oryza barthii TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00052p00202630 Amborella trichopoda AMTR_s00052p00202630 I 0.742
Aquca_027_00077 Aquilegia coerulea Aquca_027_00077 I 0.758
BGIOSGA015142 Oryza indica BGIOSGA015142 N 0.909
BGIOSGA015143 Oryza indica BGIOSGA015143 N 1.000
BGIOSGA015145 Oryza indica BGIOSGA015145 N 0.909
Bo6g067310 Brassica oleracea Bo6g067310 I 0.712
Bra003132 Brassica rapa Bra003132 I 0.712
BRADI5G09140 Brachypodium distachyon BRADI5G09140 N 0.924
Cagra.0612s0062 Capsella grandiflora Cagra.0612s0062 I 0.712
Carubv10018341m.g Capsella rubella Carubv10018341m.g I 0.712
cassava45931.m1 Manihot esculenta cassava45931.m1 I 0.712
chr1.CM0033.550.nc Lotus japonicus chr1.CM0033.550.nc I 0.742
Ciclev10013218m.g Citrus clementina Ciclev10013218m.g I 0.727
Cla018106 Citrullus lanatus Cla018106 I 0.727
Cla018556 Citrullus lanatus Cla018556 I 0.742
Cucsa.124240 Cucumis sativus Cucsa.124240 I 0.742
Cucsa.307040 Cucumis sativus Cucsa.307040 I 0.727
Eucgr.A01168 Eucalyptus grandis Eucgr.A01168 I 0.773
evm.TU.supercontig_638.2 Carica papaya evm.TU.supercontig_638.2 I 0.712
fgenesh1_pm.C_scaffold_5001425 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001425 I 0.727
gene09647-v1.0-hybrid Fragaria vesca gene09647-v1.0-hybrid N 0.712
GLYMA03G33640 Glycine max GLYMA03G33640 I 0.742
GLYMA10G05790 Glycine max GLYMA10G05790 I 0.712
GLYMA13G20160 Glycine max GLYMA13G20160 I 0.712
GLYMA19G36350 Glycine max GLYMA19G36350 I 0.727
Gorai.002G249300 Gossypium raimondii Gorai.002G249300 I 0.758
Gorai.006G168100 Gossypium raimondii Gorai.006G168100 I 0.803
Gorai.009G419300 Gossypium raimondii Gorai.009G419300 I 0.742
GRMZM2G056929 Zea mays GRMZM2G056929 N 0.909
GRMZM2G147424 Zea mays GRMZM2G147424 N 0.909
GSMUA_Achr10G13120_001 Musa acuminata GSMUA_Achr10G13120_001 I 0.773
GSMUA_Achr3G17900_001 Musa acuminata GSMUA_Achr3G17900_001 N 0.727
GSMUA_Achr6G23400_001 Musa acuminata GSMUA_Achr6G23400_001 N 0.773
LPERR04G08400 Leersia perrieri LPERR04G08400 N 0.955
LPERR04G08410 Leersia perrieri LPERR04G08410 I 0.909
Lus10015073.g Linum usitatissimum Lus10015073.g I 0.742
Lus10023177.g Linum usitatissimum Lus10023177.g I 0.742
MDP0000276000 Malus domestica MDP0000276000 N 0.773
mgf000337m Mimulus guttatus mgf000337m I 0.727
MLOC_67411 Hordeum vulgare MLOC_67411 N 0.939
MTR_7g100905 Medicago truncatula MTR_7g100905 I 0.727
OB04G18770 Oryza brachyantha OB04G18770 I 0.970
OB04G18780 Oryza brachyantha OB04G18780 I 0.924
OBART04G11660 Oryza barthii OBART04G11660 N 0.909
OGLUM04G11330 Oryza glumaepatula OGLUM04G11330 N 1.000
OGLUM04G11340 Oryza glumaepatula OGLUM04G11340 N 0.909
OMERI04G10270 Oryza meridionalis OMERI04G10270 N 0.985
OMERI04G10280 Oryza meridionalis OMERI04G10280 N 0.909
ONIVA04G09610 Oryza nivara ONIVA04G09610 N 1.000
ONIVA04G09620 Oryza nivara ONIVA04G09620 N 0.909
OPUNC04G09650 Oryza punctata OPUNC04G09650 I 0.848
OPUNC04G09660 Oryza punctata OPUNC04G09660 N 0.909
orange1.1g044991m.g Citrus sinensis orange1.1g044991m.g I 0.727
ORGLA04G0086600 Oryza glaberrima ORGLA04G0086600 N 1.000
ORGLA04G0086800 Oryza glaberrima ORGLA04G0086800 N 0.909
ORUFI04G12840 Oryza rufipogon ORUFI04G12840 N 1.000
ORUFI04G12850 Oryza rufipogon ORUFI04G12850 N 0.909
OS04G0408900 Oryza sativa OS04G0408900 N 0.909
Pavir.Ga01929 Panicum virgatum Pavir.Ga01929 N 0.894
Pavir.Gb01773 Panicum virgatum Pavir.Gb01773 N 0.939
PGSC0003DMG400001772 Solanum tuberosum PGSC0003DMG400001772 I 0.742
Pm002519 Prunus mume Pm002519 N 0.727
POPTR_0006s13230 Populus trichocarpa POPTR_0006s13230 I 0.727
POPTR_0016s08890 Populus trichocarpa POPTR_0016s08890 I 0.712
PRUPE_ppa014157mg Prunus persica PRUPE_ppa014157mg N 0.727
S1FA1 Arabidopsis thaliana AT3G53370 I 0.794
S1FA2 Oryza sativa OS04G0408700 N 1.000
SapurV1A.0112s0080 Salix purpurea SapurV1A.0112s0080 I 0.727
SapurV1A.0209s0130 Salix purpurea SapurV1A.0209s0130 I 0.727
Sb06g015340 Sorghum bicolor Sb06g015340 N 0.909
Si011030m.g Setaria italica Si011030m.g N 0.939
Solyc09g007500.2 Solanum lycopersicum Solyc09g007500.2 I 0.758
TCM_022113 Theobroma cacao TCM_022113 I 0.773
Traes_2AL_65586C538 Triticum aestivum Traes_2AL_65586C538 N 0.924
Traes_2BL_26A5F9082 Triticum aestivum Traes_2BL_26A5F9082 N 0.924
Traes_2DL_032C7FC8C Triticum aestivum Traes_2DL_032C7FC8C N 0.924
VIT_06s0004g03160 Vitis vinifera VIT_06s0004g03160 I 0.773
VIT_08s0040g02220 Vitis vinifera VIT_08s0040g02220 I 0.712