Pavir.Gb01773 (Panicum virgatum)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04689 (S1FA) IPR006779 Pavir.Gb01773 T321518_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Gb01773.1.p S1FA 61 126

Links

Other S1FA family TFs
Other Panicum virgatum TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29805.m001471 Ricinus communis 29805.m001471 I 0.712
AMTR_s00052p00202630 Amborella trichopoda AMTR_s00052p00202630 I 0.742
Aquca_027_00077 Aquilegia coerulea Aquca_027_00077 I 0.818
BGIOSGA015142 Oryza indica BGIOSGA015142 N 0.909
BGIOSGA015145 Oryza indica BGIOSGA015145 N 0.909
Bo00703s130 Brassica oleracea Bo00703s130 I 0.712
Bo00703s150 Brassica oleracea Bo00703s150 I 0.712
Bo1g144300 Brassica oleracea Bo1g144300 I
Bo3g061880 Brassica oleracea Bo3g061880 I
Bo5g138130 Brassica oleracea Bo5g138130 I
Bo6g067310 Brassica oleracea Bo6g067310 I 0.727
Bostr.11793s0058 Boechera stricta Bostr.11793s0058 I 0.712
Bostr.22252s0094 Boechera stricta Bostr.22252s0094 I
Bostr.23794s0377 Boechera stricta Bostr.23794s0377 I
Bra003132 Brassica rapa Bra003132 I 0.727
Bra006994 Brassica rapa Bra006994 I
Bra029784 Brassica rapa Bra029784 I
Bra034084 Brassica rapa Bra034084 I
Bra039779 Brassica rapa Bra039779 I 0.712
Cagra.0612s0062 Capsella grandiflora Cagra.0612s0062 I 0.727
Cagra.0666s0032 Capsella grandiflora Cagra.0666s0032 I
Carubv10015035m.g Capsella rubella Carubv10015035m.g I
Carubv10018341m.g Capsella rubella Carubv10018341m.g I 0.727
Carubv10025429m.g Capsella rubella Carubv10025429m.g I
Ca_12027 Cicer arietinum Ca_12027 I
Ca_12028 Cicer arietinum Ca_12028 I
chr1.CM0033.550.nc Lotus japonicus chr1.CM0033.550.nc I 0.727
Ciclev10013218m.g Citrus clementina Ciclev10013218m.g I 0.742
Cla018106 Citrullus lanatus Cla018106 I 0.742
Cla018556 Citrullus lanatus Cla018556 I 0.758
Cucsa.124240 Cucumis sativus Cucsa.124240 I 0.758
Cucsa.307040 Cucumis sativus Cucsa.307040 I 0.742
Eucgr.A01168 Eucalyptus grandis Eucgr.A01168 I 0.788
evm.TU.supercontig_638.2 Carica papaya evm.TU.supercontig_638.2 I 0.727
fgenesh1_pm.C_scaffold_5001425 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001425 I 0.742
fgenesh2_kg.3__997__AT3G09735.1 Arabidopsis lyrata fgenesh2_kg.3__997__AT3G09735.1 I
gene09647-v1.0-hybrid Fragaria vesca gene09647-v1.0-hybrid N 0.758
GLYMA03G33640 Glycine max GLYMA03G33640 I 0.727
GLYMA10G05790 Glycine max GLYMA10G05790 I
GLYMA13G20160 Glycine max GLYMA13G20160 I
GLYMA19G36350 Glycine max GLYMA19G36350 I 0.712
Gorai.002G249300 Gossypium raimondii Gorai.002G249300 I 0.742
Gorai.006G168100 Gossypium raimondii Gorai.006G168100 I 0.788
Gorai.009G419300 Gossypium raimondii Gorai.009G419300 I 0.727
GSMUA_Achr10G13120_001 Musa acuminata GSMUA_Achr10G13120_001 I 0.818
LPERR04G08410 Leersia perrieri LPERR04G08410 I 0.879
Lus10015073.g Linum usitatissimum Lus10015073.g I 0.712
Lus10023177.g Linum usitatissimum Lus10023177.g I 0.712
mgf000337m Mimulus guttatus mgf000337m I 0.742
mgf004062m Mimulus guttatus mgf004062m I 0.712
MTR_7g100880 Medicago truncatula MTR_7g100880 I
MTR_7g100890 Medicago truncatula MTR_7g100890 I
MTR_7g100905 Medicago truncatula MTR_7g100905 I 0.712
OB04G18770 Oryza brachyantha OB04G18770 I 0.939
OB04G18780 Oryza brachyantha OB04G18780 I 0.924
OBART04G11660 Oryza barthii OBART04G11660 N 0.909
OGLUM04G11340 Oryza glumaepatula OGLUM04G11340 N 0.909
OMERI04G10280 Oryza meridionalis OMERI04G10280 N 0.909
ONIVA04G09620 Oryza nivara ONIVA04G09620 N 0.909
OPUNC04G09660 Oryza punctata OPUNC04G09660 N 0.909
orange1.1g044991m.g Citrus sinensis orange1.1g044991m.g I 0.742
ORGLA04G0086800 Oryza glaberrima ORGLA04G0086800 N 0.909
ORUFI04G12850 Oryza rufipogon ORUFI04G12850 N 0.909
OS04G0408900 Oryza sativa OS04G0408900 N 0.909
PGSC0003DMG400001772 Solanum tuberosum PGSC0003DMG400001772 I 0.727
PGSC0003DMG400020934 Solanum tuberosum PGSC0003DMG400020934 I
PGSC0003DMG401017590 Solanum tuberosum PGSC0003DMG401017590 I
PK08477.1 Cannabis sativa PK08477.1 I
POPTR_0006s13230 Populus trichocarpa POPTR_0006s13230 I 0.712
POPTR_0016s08890 Populus trichocarpa POPTR_0016s08890 I 0.727
S1FA1 Arabidopsis thaliana AT3G53370 I 0.794
S1FA2 Arabidopsis thaliana AT2G37120 I
S1FA3 Arabidopsis thaliana AT3G09735 D
SapurV1A.0112s0080 Salix purpurea SapurV1A.0112s0080 I 0.742
SapurV1A.0209s0130 Salix purpurea SapurV1A.0209s0130 I 0.742
scaffold_402348.1 Arabidopsis lyrata scaffold_402348.1 I 0.712
Solyc09g007500.2 Solanum lycopersicum Solyc09g007500.2 I 0.742
TCM_022113 Theobroma cacao TCM_022113 I 0.758
Thhalv10010878m.g Eutrema salsugineum Thhalv10010878m.g I 0.712
Thhalv10017496m.g Eutrema salsugineum Thhalv10017496m.g I 0.712
Thhalv10021874m.g Eutrema salsugineum Thhalv10021874m.g I
VIT_06s0004g03160 Vitis vinifera VIT_06s0004g03160 I 0.758
VIT_08s0040g02220 Vitis vinifera VIT_08s0040g02220 I 0.712