PK08477.1 (Cannabis sativa)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04689 (S1FA) IPR006779 PK08477.1 T321531_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
S1FA3
M07252_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT3G09735_col_a 		0.758 0.758
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK08477.1 S1FA 10 75

Links

Other S1FA family TFs
Other Cannabis sativa TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI005969 Acyrthosiphon pisum ACYPI005969 I
CGI_10026910 Crassostrea gigas CGI_10026910 N
ENSAMXG00000018801 Astyanax mexicanus ENSAMXG00000018801 N
ENSGMOG00000014914 Gadus morhua ENSGMOG00000014914 N
ENSLOCG00000002612 Lepisosteus oculatus ENSLOCG00000002612 N
ENSONIG00000005197 Oreochromis niloticus ENSONIG00000005197 N
ENSPFOG00000009286 Poecilia formosa ENSPFOG00000009286 N
ENSPFOG00000011330 Poecilia formosa ENSPFOG00000011330 N
ENSXMAG00000004642 Xiphophorus maculatus ENSXMAG00000004642 N
ENSXMAG00000013848 Xiphophorus maculatus ENSXMAG00000013848 N
glis2.S Xenopus laevis XB-GENE-6251812 N
glis2a Danio rerio ENSDARG00000078388 N
glis2b Gasterosteus aculeatus ENSGACG00000011323 N
glis2b Danio rerio ENSDARG00000100232 N
glis2b Oryzias latipes ENSORLG00000008275 N
glis2b Takifugu rubripes ENSTRUG00000006205 N
LotgiG97849 Lottia gigantea LotgiG97849 N