GMEB1 (Canis familiaris)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 ENSCAFG00000011711 T321632_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GMEB1
M02460_2.00 		Homo sapiens
NNVCGYNNN
NNNRCGBNN		 PBM
Weirauch et al.(2014)
pTH9026 		0.994 1.000
GMEB1
M02465_2.00 		Pteropus vampyrus
NBACGYHN
NDRCGTVN		 PBM
Weirauch et al.(2014)
pTH9282 		0.994 1.000
GMEB1
M05737_2.00 		Homo sapiens
KKACGTAMNKTACGTAM
KTACGTAMNKTACGTMM		 SELEX
Yin et al.(2017)
GMEB1_FL_HT-SELEX 		0.994 1.000
GMEB1
M05738_2.00 		Homo sapiens
KNRCGTVRBBVCGYHN
NDRCGBVVYBACGYNM		 SELEX
Yin et al.(2017)
GMEB1_FL_Methyl-HT-SELEX 		0.994 1.000
ENSMODG00000010947
M02463_2.00 		Monodelphis domestica
NNRCGYN
NRCGYNN		 PBM
Weirauch et al.(2014)
pTH8671 		0.994 0.987
Gmeb1
M00190_2.00 		Mus musculus
NNRCGYNNN
NNNRCGYNN		 PBM
Badis et al.(2009)
Gmeb1_1745 		0.994 0.987
GMEB1
M02461_2.00 		Meleagris gallopavo
NNACGYNNN
NNNRCGTNN		 PBM
Weirauch et al.(2014)
pTH8318 		0.994 0.974
gmeb1
M02468_2.00 		Xenopus tropicalis
NNRCGYNNN
NNNRCGYNN		 PBM
Weirauch et al.(2014)
pTH8745 		0.991 0.921
gmeb1.S
M02469_2.00 		Xenopus laevis
NKACGTVY
RBACGTMN		 PBM
Weirauch et al.(2014)
pTH9298 		0.991 0.908
GMEB2
M02462_2.00 		Meleagris gallopavo
BBACGYH
DRCGTVV		 PBM
Weirauch et al.(2014)
pTH9211 		0.988 0.750
GMEB2
M02458_2.00 		Anolis carolinensis
NNACGYANN
NNTRCGTNN		 PBM
Weirauch et al.(2014)
pTH9219 		0.987 0.750
Gmeb2
M00824_2.00 		Mus musculus
NNACGYNN
NNRCGTNN		 PBM
Weirauch et al.(2013)
pTH3084 		0.986 0.724
GMEB2
M03471_2.00 		Homo sapiens
YBACGYAM
KTRCGTVR		 SELEX
Jolma et al.(2013)
GMEB2_1 		0.986 0.724
GMEB2
M03472_2.00 		Homo sapiens
WACGTGSTYACGYW
WRCGTRASCACGTW		 SELEX
Jolma et al.(2013)
GMEB2_2 		0.986 0.724
GMEB2
M03473_2.00 		Homo sapiens
YACGTAACBBACGYA
TRCGTVVGTTACGTR		 SELEX
Jolma et al.(2013)
GMEB2_3 		0.986 0.724
GMEB2
M03474_2.00 		Homo sapiens
BKACGTAM
KTACGTMV		 SELEX
Jolma et al.(2013)
GMEB2_4 		0.986 0.724
GMEB2
M05735_2.00 		Homo sapiens
BYACGTAVSBTACGTRV
BYACGTAVSBTACGTRV		 SELEX
Yin et al.(2017)
GMEB2_eDBD_HT-SELEX 		0.986 0.724
GMEB2
M05736_2.00 		Homo sapiens
BBACGYAMVBNACGYVV
BBRCGTNVBKTRCGTVV		 SELEX
Yin et al.(2017)
GMEB2_eDBD_Methyl-HT-SELEX 		0.986 0.724
ENSCING00000003435
M02459_2.00 		Ciona intestinalis
NKACGTMVNN
NNBKACGTMN		 PBM
Weirauch et al.(2014)
pTH9356 		0.962 0.632
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000017230 SAND 79 155

Links

Other SAND family TFs
Other Canis familiaris TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_05801 Capronia coronata A1O1_05801 I 0.000
A1O3_03555 Capronia epimyces A1O3_03555 I 0.000
A1O5_06619 Cladophialophora psammophila A1O5_06619 I 0.000
A1O7_00849 Cladophialophora yegresii A1O7_00849 I 0.000
AB07639.1 Alternaria brassicicola AB07639.1 I 0.000
ACLA_026280 Aspergillus clavatus CADACLAG00002102 I 0.000
AFUA_1G09190 Aspergillus fumigatus CADAFUAG00007026 I 0.000
ANIA_01368 Aspergillus nidulans CADANIAG00001243 D 0.000
BDDG_02608 Blastomyces dermatitidis BDDG_02608 I 0.000
CADANGAG00006390 Aspergillus niger CADANGAG00006390 I 0.000
CPC735_034820 Coccidioides posadasii CPC735_034820 I 0.000
EURHEDRAFT_506166 Aspergillus ruber EURHEDRAFT_506166 I 0.000
G647_00903 Cladophialophora carrionii G647_00903 I 0.000
HCBG_05364 Histoplasma capsulatum HCBG_05364 I 0.000
HMPREF1120_02804 Exophiala dermatitidis HMPREF1120_02804 I 0.000
HMPREF1541_00475 Cyphellophora europaea HMPREF1541_00475 I 0.000
LEMA_P054920.1 Leptosphaeria maculans LEMA_P054920.1 I 0.000
PABG_06647 Paracoccidioides brasiliensis PABG_06647 I 0.000
Pc16g02310 Penicillium chrysogenum Pc16g02310 I 0.000
PCH_Pc16g02310 Penicillium rubens PCH_Pc16g02310 I 0.000
PDE_06784 Penicillium oxalicum PDE_06784 I 0.000
PDIP_41390 Penicillium digitatum PDIP_41390 I 0.000
PMAA_045800 Talaromyces marneffei PMAA_045800 I 0.000
PMAA_045800 Penicillium marneffei PMAA_045800 I 0.000
PV04_01175 Capronia semiimmersa PV04_01175 I 0.000
PV05_11903 Exophiala xenobiotica PV05_11903 N 0.000
PV07_02125 Cladophialophora immunda PV07_02125 I 0.000
PV08_05229 Exophiala spinifera PV08_05229 I 0.000
PVAR5_4509 Byssochlamys spectabilis PVAR5_4509 I 0.000
SETTUDRAFT_97479 Setosphaeria turcica SETTUDRAFT_97479 I 0.000
UREG_05754 Uncinocarpus reesii UREG_05754 I 0.000
Z517_07725 Fonsecaea pedrosoi Z517_07725 I 0.000
Z519_09046 Cladophialophora bantiana Z519_09046 I 0.000