GMEB2 (Otolemur garnettii)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 ENSOGAG00000008826 T321830_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gmeb2
M00824_2.00 		Mus musculus
NNACGYNN
NNRCGTNN		 PBM
Weirauch et al.(2013)
pTH3084 		0.994 1.000
GMEB2
M03471_2.00 		Homo sapiens
YBACGYAM
KTRCGTVR		 SELEX
Jolma et al.(2013)
GMEB2_1 		0.994 1.000
GMEB2
M03472_2.00 		Homo sapiens
WACGTGSTYACGYW
WRCGTRASCACGTW		 SELEX
Jolma et al.(2013)
GMEB2_2 		0.994 1.000
GMEB2
M03473_2.00 		Homo sapiens
YACGTAACBBACGYA
TRCGTVVGTTACGTR		 SELEX
Jolma et al.(2013)
GMEB2_3 		0.994 1.000
GMEB2
M03474_2.00 		Homo sapiens
BKACGTAM
KTACGTMV		 SELEX
Jolma et al.(2013)
GMEB2_4 		0.994 1.000
GMEB2
M05735_2.00 		Homo sapiens
BYACGTAVSBTACGTRV
BYACGTAVSBTACGTRV		 SELEX
Yin et al.(2017)
GMEB2_eDBD_HT-SELEX 		0.994 1.000
GMEB2
M05736_2.00 		Homo sapiens
BBACGYAMVBNACGYVV
BBRCGTNVBKTRCGTVV		 SELEX
Yin et al.(2017)
GMEB2_eDBD_Methyl-HT-SELEX 		0.994 1.000
GMEB2
M02458_2.00 		Anolis carolinensis
NNACGYANN
NNTRCGTNN		 PBM
Weirauch et al.(2014)
pTH9219 		0.992 0.947
GMEB2
M02462_2.00 		Meleagris gallopavo
BBACGYH
DRCGTVV		 PBM
Weirauch et al.(2014)
pTH9211 		0.992 0.933
GMEB1
M02461_2.00 		Meleagris gallopavo
NNACGYNNN
NNNRCGTNN		 PBM
Weirauch et al.(2014)
pTH8318 		0.986 0.747
ENSMODG00000010947
M02463_2.00 		Monodelphis domestica
NNRCGYN
NRCGYNN		 PBM
Weirauch et al.(2014)
pTH8671 		0.986 0.747
GMEB1
M02460_2.00 		Homo sapiens
NNVCGYNNN
NNNRCGBNN		 PBM
Weirauch et al.(2014)
pTH9026 		0.986 0.733
Gmeb1
M00190_2.00 		Mus musculus
NNRCGYNNN
NNNRCGYNN		 PBM
Badis et al.(2009)
Gmeb1_1745 		0.986 0.733
GMEB1
M02465_2.00 		Pteropus vampyrus
NBACGYHN
NDRCGTVN		 PBM
Weirauch et al.(2014)
pTH9282 		0.986 0.733
GMEB1
M05737_2.00 		Homo sapiens
KKACGTAMNKTACGTAM
KTACGTAMNKTACGTMM		 SELEX
Yin et al.(2017)
GMEB1_FL_HT-SELEX 		0.986 0.733
GMEB1
M05738_2.00 		Homo sapiens
KNRCGTVRBBVCGYHN
NDRCGBVVYBACGYNM		 SELEX
Yin et al.(2017)
GMEB1_FL_Methyl-HT-SELEX 		0.986 0.733
gmeb1.S
M02469_2.00 		Xenopus laevis
NKACGTVY
RBACGTMN		 PBM
Weirauch et al.(2014)
pTH9298 		0.981 0.707
gmeb1
M02468_2.00 		Xenopus tropicalis
NNRCGYNNN
NNNRCGYNN		 PBM
Weirauch et al.(2014)
pTH8745 		0.981 0.693
ENSCING00000003435
M02459_2.00 		Ciona intestinalis
NKACGTMVNN
NNBKACGTMN		 PBM
Weirauch et al.(2014)
pTH9356 		0.956 0.627
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000007914 SAND 87 162

Links

Other SAND family TFs
Other Otolemur garnettii TFs

139 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
16628_YMR176W Saccharomyces paradoxus 16628_YMR176W I 0.000
17061_Multiple Saccharomyces mikatae 17061_Multiple I 0.000
18935_YMR176W Saccharomyces bayanus 18935_YMR176W I 0.000
AACERI_AaceriAFL127C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFL127C I 0.000
ACRE_026770 Acremonium chrysogenum ACRE_026770 I 0.000
ACYPI004768 Acyrthosiphon pisum ACYPI004768 N 0.000
AGOS_AFL127C Ashbya gossypii AGOS_AFL127C I 0.000
BAUCODRAFT_567336 Baudoinia compniacensis BAUCODRAFT_567336 I 0.000
BGHDH14_bgh06435 Blumeria graminis BGHDH14_bgh06435 I 0.000
DOTSEDRAFT_72726 Dothistroma septosporum DOTSEDRAFT_72726 I 0.000
ECM5 Saccharomyces cerevisiae YMR176W I 0.000
ENSCSAVG00000000499 Ciona savignyi ENSCSAVG00000000499 N 0.000
ENSGMOG00000019538 Gadus morhua ENSGMOG00000019538 N 0.000
estExt_Genewise1Plus.C_chr_80065 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_80065 I 0.000
fgenesh1_pg.C_scaffold_2000567 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_2000567 I 0.000
KAFR_0A07050 Kazachstania africana KAFR_0A07050 I 0.000
KLLA0_C16203g Kluyveromyces lactis KLLA0_C16203g I 0.000
KLTH0H03410g Lachancea thermotolerans KLTH0H03410g I 0.000
KLTH0H03410g Kluyveromyces thermotolerans KLTH0H03410g I 0.000
Kwal_24206 Kluyveromyces waltii Kwal_24206 I 0.000
L798_11923 Zootermopsis nevadensis L798_11923 N 0.000
LLOJ009523 Lutzomyia longipalpis LLOJ009523 N 0.000
MYCFIDRAFT_104171 Pseudocercospora fijiensis MYCFIDRAFT_104171 I 0.000
Mycgr3G74352 Zymoseptoria tritici Mycgr3G74352 I 0.000
NCAS_0D03980 Naumovozyma castellii NCAS_0D03980 I 0.000
OIDMADRAFT_165409 Oidiodendron maius OIDMADRAFT_165409 I 0.000
PFICI_11606 Pestalotiopsis fici PFICI_11606 I 0.000
PV04_04630 Capronia semiimmersa PV04_04630 I 0.000
SAKL0A03674g Lachancea kluyveri SAKL0A03674g I 0.000
Scas_Contig720.39 Saccharomyces castellii Scas_Contig720.39 I 0.000
SEPMUDRAFT_46716 Sphaerulina musiva SEPMUDRAFT_46716 I 0.000
SKUD_186004 Saccharomyces kudriavzevii SKUD_186004 I 0.000
SU7_0694 Saccharomyces arboricola SU7_0694 I 0.000
TRIATDRAFT_229470 Trichoderma atroviride TRIATDRAFT_229470 I 0.000
ZBAI_04622 Zygosaccharomyces bailii ZBAI_04622 I 0.000
ZBAI_06663 Zygosaccharomyces bailii ZBAI_06663 I 0.000
ZYRO0E07546g Zygosaccharomyces rouxii ZYRO0E07546g I 0.000