OBART09G15750 (Oryza barthii)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 OBART09G15750 T322786_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.896 0.747
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART09G15750.1 SBP 45 119

Links

Other SBP family TFs
Other Oryza barthii TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_22589 Ancylostoma caninum ANCCAN_22589 I
augustus_masked-nMf.1.1.scaf00383-processed-gene-0.1 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf00383-processed-gene-0.1 I
CBN08077 Caenorhabditis brenneri CBN08077 I
CBN16259 Caenorhabditis brenneri CBN16259 I
CJA19491 Caenorhabditis japonica CJA19491 I
CRE28659 Caenorhabditis remanei CRE28659 I
CRE30546 Caenorhabditis remanei CRE30546 I
L596_g14937 Steinernema carpocapsae L596_g14937 I
L596_g7829 Steinernema carpocapsae L596_g7829 I
L889_g304 Steinernema feltiae L889_g304 I
L892_g3438 Steinernema scapterisci L892_g3438 I
L892_g3686 Steinernema scapterisci L892_g3686 I
L893_g13425 Steinernema glaseri L893_g13425 I
L898_g30036 Steinernema monticolum L898_g30036 I
L898_g9613 Steinernema monticolum L898_g9613 I
Minc11986 Meloidogyne incognita Minc11986 I
nhr-118 Caenorhabditis elegans WBGene00003708 I
nhr-46 Caenorhabditis elegans WBGene00003636 D
PPA17263 Pristionchus pacificus PPA17263 I
scaffold19-EXSNAP2012.26 Pristionchus exspectatus scaffold19-EXSNAP2012.26 I
scaffold303-EXSNAP2012.4 Pristionchus exspectatus scaffold303-EXSNAP2012.4 I
scaffold731-EXSNAP2012.1 Pristionchus exspectatus scaffold731-EXSNAP2012.1 I