CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

OGLUM09G15430 *(Oryza glumaepatula)* SBP
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF03110 (SBP)	IPR004333	OGLUM09G15430	T322802_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
estExt_fgenesh1_pg.C_1940033 M02479_2.00	Physcomitrella patens	NNGTACGDH	DHCGTACNN	PBM Weirauch et al.(2014) pTH8664	0.931	0.747
PK06791.1 M02482_2.00	Cannabis sativa	NNGTACGRN	NYCGTACNN	PBM Weirauch et al.(2014) pTH9583	0.920	0.653
SPL1 M00887_2.00	Arabidopsis thaliana	NGTACGGHN	NDCCGTACN	PBM Franco-Zorrilla et al.(2014) SPL1	0.905	0.680
SPL1 M07259_2.00	Arabidopsis thaliana	NNNBGTACGGW	WCCGTACVNNN	Dap-seq OMalley et al.(2016) SPL1_col_a	0.905	0.680
SPL1 M07260_2.00	Arabidopsis thaliana	NNGTACGKWH	DWMCGTACNN	Dap-seq OMalley et al.(2016) SPL1_colamp_a	0.905	0.680
SPL12 M02475_2.00	Arabidopsis thaliana	NGTACGDN	NHCGTACN	PBM Weirauch et al.(2014) pTH7500	0.888	0.667
For this family, TFs with SR scores > 0.885* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
OGLUM09G15430.1	SBP	75	156	CQVEGCGVDLSGVKPYYCRHKVCYMHAKEPIVVVAGLEQRFCQQCSRCSVHMVRFHQLPEFDQEKKSCRRRLAGHNERRRKP

Links
Other SBP family TFs
Other *Oryza glumaepatula* TFs