Si017338m.g (Setaria italica)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 Si017338m.g T323047_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL8
M02714_2.00 		Arabidopsis thaliana
DWWDDDGTACRNWNHW
WDNWNYGTACHHHWWH		 SELEX
Mathelier et al.(2014)
MA0578.1 		0.930 0.800
fgenesh1_pg.scaffold_252000020
M02481_2.00 		Physcomitrella patens
NNNKRCVNN
NNBGYMNNN		 PBM
Weirauch et al.(2014)
pTH8491 		0.905 0.773
fgenesh1_pg.scaffold_194000034
M02480_2.00 		Physcomitrella patens
NNNGTACNNN
NNNGTACNNN		 PBM
Weirauch et al.(2014)
pTH8580 		0.894 0.773
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si017338m SBP 191 265

Links

Other SBP family TFs
Other Setaria italica TFs

147 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30169.m006403 Ricinus communis 30169.m006403 I 0.000
AT2G42280 Arabidopsis thaliana AT2G42280 D 0.000
BGIOSGA004992 Oryza indica BGIOSGA004992 I 0.000
BGIOSGA008576 Oryza indica BGIOSGA008576 I 0.000
BGIOSGA016651 Oryza indica BGIOSGA016651 I 0.000
BHLH128 Arabidopsis thaliana AT1G05805 I 0.000
Bo4g015860 Brassica oleracea Bo4g015860 I 0.000
Bo5g006980 Brassica oleracea Bo5g006980 I 0.000
Bo5g007030 Brassica oleracea Bo5g007030 I 0.000
Bostr.25219s0385 Boechera stricta Bostr.25219s0385 I 0.000
Bostr.25993s0551 Boechera stricta Bostr.25993s0551 I 0.000
Bra004678 Brassica rapa Bra004678 I 0.000
Bra015456 Brassica rapa Bra015456 I 0.000
BRADI2G57800 Brachypodium distachyon BRADI2G57800 I 0.000
BRADI3G48070 Brachypodium distachyon BRADI3G48070 I 0.000
BRADI4G33670 Brachypodium distachyon BRADI4G33670 I 0.000
Cagra.1671s0210 Capsella grandiflora Cagra.1671s0210 I 0.000
Cagra.2636s0012 Capsella grandiflora Cagra.2636s0012 I 0.000
Carubv10009382m.g Capsella rubella Carubv10009382m.g I 0.000
Carubv10023498m.g Capsella rubella Carubv10023498m.g I 0.000
Ca_07284 Cicer arietinum Ca_07284 I 0.000
Ca_14007 Cicer arietinum Ca_14007 I 0.000
Ca_18899 Cicer arietinum Ca_18899 I 0.000
Ciclev10020681m.g Citrus clementina Ciclev10020681m.g I 0.000
Cla006394 Citrullus lanatus Cla006394 I 0.000
Cucsa.094340 Cucumis sativus Cucsa.094340 I 0.000
Cucsa.143260 Cucumis sativus Cucsa.143260 I 0.000
Eucgr.A00213 Eucalyptus grandis Eucgr.A00213 I 0.000
evm.TU.supercontig_85.115 Carica papaya evm.TU.supercontig_85.115 I 0.000
e_gw1.272.41.1 Physcomitrella patens e_gw1.272.41.1 I 0.000
F775_24576 Aegilops tauschii F775_24576 I 0.000
F775_26506 Aegilops tauschii F775_26506 I 0.000
fgenesh2_kg.1__542__AT1G05805.1 Arabidopsis lyrata fgenesh2_kg.1__542__AT1G05805.1 I 0.000
GRMZM2G114873 Zea mays GRMZM2G114873 I 0.000
GRMZM2G142932 Zea mays GRMZM2G142932 I 0.000
GRMZM2G153454 Zea mays GRMZM2G153454 I 0.000
GRMZM2G437481 Zea mays GRMZM2G437481 I 0.000
GSMUA_Achr1G27710_001 Musa acuminata GSMUA_Achr1G27710_001 I 0.000
GSMUA_Achr6G21220_001 Musa acuminata GSMUA_Achr6G21220_001 I 0.000
GSMUA_Achr8G01370_001 Musa acuminata GSMUA_Achr8G01370_001 I 0.000
GSMUA_Achr8G32130_001 Musa acuminata GSMUA_Achr8G32130_001 I 0.000
LPERR01G35240 Leersia perrieri LPERR01G35240 I 0.000
LPERR02G18900 Leersia perrieri LPERR02G18900 I 0.000
LPERR08G16800 Leersia perrieri LPERR08G16800 I 0.000
LPERR09G10800 Leersia perrieri LPERR09G10800 I 0.000
Lus10025518.g Linum usitatissimum Lus10025518.g I 0.000
Lus10026733.g Linum usitatissimum Lus10026733.g I 0.000
MDP0000307685 Malus domestica MDP0000307685 I 0.000
mgf016092m Mimulus guttatus mgf016092m I 0.000
MLOC_12058 Hordeum vulgare MLOC_12058 I 0.000
MLOC_20318 Hordeum vulgare MLOC_20318 I 0.000
MLOC_30102 Hordeum vulgare MLOC_30102 I 0.000
MTR_1g052470 Medicago truncatula MTR_1g052470 I 0.000
MTR_1g116790 Medicago truncatula MTR_1g116790 I 0.000
MTR_4g065870 Medicago truncatula MTR_4g065870 I 0.000
MTR_7g092540 Medicago truncatula MTR_7g092540 I 0.000
OB01G49420 Oryza brachyantha OB01G49420 I 0.000
OB02G30670 Oryza brachyantha OB02G30670 I 0.000
OB04G24170 Oryza brachyantha OB04G24170 I 0.000
OBART01G40680 Oryza barthii OBART01G40680 I 0.000
OBART02G23210 Oryza barthii OBART02G23210 I 0.000
OBART04G16900 Oryza barthii OBART04G16900 I 0.000
OGLUM01G44860 Oryza glumaepatula OGLUM01G44860 I 0.000
OGLUM04G16920 Oryza glumaepatula OGLUM04G16920 I 0.000
OLONG_004619 Oryza longistaminata OLONG_004619 I 0.000
OLONG_009256 Oryza longistaminata OLONG_009256 I 0.000
OMERI01G37660 Oryza meridionalis OMERI01G37660 I 0.000
OMERI02G22740 Oryza meridionalis OMERI02G22740 I 0.000
OMERI04G14260 Oryza meridionalis OMERI04G14260 I 0.000
ONIVA01G45730 Oryza nivara ONIVA01G45730 I 0.000
ONIVA02G26110 Oryza nivara ONIVA02G26110 I 0.000
ONIVA04G15000 Oryza nivara ONIVA04G15000 I 0.000
OPUNC01G39450 Oryza punctata OPUNC01G39450 I 0.000
OPUNC02G21170 Oryza punctata OPUNC02G21170 I 0.000
OPUNC04G14700 Oryza punctata OPUNC04G14700 I 0.000
orange1.1g038558m.g Citrus sinensis orange1.1g038558m.g I 0.000
ORGLA01G0346300 Oryza glaberrima ORGLA01G0346300 I 0.000
ORGLA02G0200100 Oryza glaberrima ORGLA02G0200100 I 0.000
ORGLA04G0140000 Oryza glaberrima ORGLA04G0140000 I 0.000
ORUFI01G44010 Oryza rufipogon ORUFI01G44010 I 0.000
ORUFI02G24640 Oryza rufipogon ORUFI02G24640 I 0.000
ORUFI04G18350 Oryza rufipogon ORUFI04G18350 I 0.000
OS01G0900800 Oryza sativa OS01G0900800 I 0.000
OS04G0489600 Oryza sativa OS04G0489600 I 0.000
Pavir.Aa01423 Panicum virgatum Pavir.Aa01423 I 0.000
Pavir.Ab02229 Panicum virgatum Pavir.Ab02229 I 0.000
Pavir.Ba00676 Panicum virgatum Pavir.Ba00676 I 0.000
Pavir.Bb03157 Panicum virgatum Pavir.Bb03157 I 0.000
Pavir.Fa00493 Panicum virgatum Pavir.Fa00493 I 0.000
Pavir.Ga01365 Panicum virgatum Pavir.Ga01365 I 0.000
Pavir.Gb01377 Panicum virgatum Pavir.Gb01377 I 0.000
Pavir.J01306 Panicum virgatum Pavir.J01306 I 0.000
Pavir.J08536 Panicum virgatum Pavir.J08536 I 0.000
Pavir.J25484 Panicum virgatum Pavir.J25484 I 0.000
PDK_20s1484071g001 Phoenix dactylifera PDK_20s1484071g001 I 0.000
PDK_20s1546591g001 Phoenix dactylifera PDK_20s1546591g001 I 0.000
PDK_20s1630671g001 Phoenix dactylifera PDK_20s1630671g001 I 0.000
POPTR_0003s22290 Populus trichocarpa POPTR_0003s22290 I 0.000
SapurV1A.0009s0400 Salix purpurea SapurV1A.0009s0400 I 0.000
SapurV1A.0111s0030 Salix purpurea SapurV1A.0111s0030 I 0.000
SapurV1A.1898s0040 Salix purpurea SapurV1A.1898s0040 I 0.000
Sb03g042860 Sorghum bicolor Sb03g042860 I 0.000
Sb04g025260 Sorghum bicolor Sb04g025260 I 0.000
Sb06g020810 Sorghum bicolor Sb06g020810 I 0.000
Sb07g027810 Sorghum bicolor Sb07g027810 I 0.000
scaffold_403077.1 Arabidopsis lyrata scaffold_403077.1 I 0.000
Si001123m.g Setaria italica Si001123m.g I 0.000
Si010513m.g Setaria italica Si010513m.g I 0.000
Si013950m.g Setaria italica Si013950m.g I 0.000
Si030166m.g Setaria italica Si030166m.g I 0.000
Thhalv10008050m.g Eutrema salsugineum Thhalv10008050m.g I 0.000
TRAES3BF135900010CFD_g Triticum aestivum TRAES3BF135900010CFD_g I 0.000
Traes_3AL_B68C491B0 Triticum aestivum Traes_3AL_B68C491B0 I 0.000
Traes_5BL_4317E525B Triticum aestivum Traes_5BL_4317E525B I 0.000
Traes_6AL_9437F730F Triticum aestivum Traes_6AL_9437F730F I 0.000
Traes_6BL_868408DFC Triticum aestivum Traes_6BL_868408DFC I 0.000
Traes_6DL_62A15AED6 Triticum aestivum Traes_6DL_62A15AED6 I 0.000
TRIUR3_16394 Triticum urartu TRIUR3_16394 I 0.000
TRIUR3_33816 Triticum urartu TRIUR3_33816 I 0.000
VIT_06s0004g01740 Vitis vinifera VIT_06s0004g01740 I 0.000