MDP0000263766 (Malus domestica)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 MDP0000263766 T323579_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.946 0.867
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000263766 SBP 97 171

Links

Other SBP family TFs
Other Malus domestica TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30054.m000824 Ricinus communis 30054.m000824 N 0.000
Al_scaffold_0001_3341 Arabidopsis lyrata Al_scaffold_0001_3341 N 0.000
Aquca_005_00468 Aquilegia coerulea Aquca_005_00468 N 0.000
AT1G32700 Arabidopsis thaliana AT1G32700 N 0.000
AT4G17900 Arabidopsis thaliana AT4G17900 N 0.000
AT5G46710 Arabidopsis thaliana AT5G46710 N 0.000
Bo1g018010 Brassica oleracea Bo1g018010 N 0.000
Bo7g075640 Brassica oleracea Bo7g075640 N 0.000
Bo7g105550 Brassica oleracea Bo7g105550 N 0.000
Bo8g028900 Brassica oleracea Bo8g028900 N 0.000
Bo8g049810 Brassica oleracea Bo8g049810 N 0.000
Bo9g065480 Brassica oleracea Bo9g065480 N 0.000
Bostr.28243s0064 Boechera stricta Bostr.28243s0064 N 0.000
Bostr.30275s0258 Boechera stricta Bostr.30275s0258 N 0.000
Bostr.3359s0088 Boechera stricta Bostr.3359s0088 N 0.000
Bra012632 Brassica rapa Bra012632 N 0.000
Bra013266 Brassica rapa Bra013266 N 0.000
Bra017531 Brassica rapa Bra017531 N 0.000
Bra021029 Brassica rapa Bra021029 N 0.000
Bra023280 Brassica rapa Bra023280 N 0.000
Bra025003 Brassica rapa Bra025003 N 0.000
Bra035494 Brassica rapa Bra035494 N 0.000
Cagra.0751s0029 Capsella grandiflora Cagra.0751s0029 N 0.000
Cagra.3356s0083 Capsella grandiflora Cagra.3356s0083 N 0.000
Cagra.4962s0001 Capsella grandiflora Cagra.4962s0001 N 0.000
Carubv10005524m.g Capsella rubella Carubv10005524m.g N 0.000
Carubv10009979m.g Capsella rubella Carubv10009979m.g N 0.000
Carubv10027053m.g Capsella rubella Carubv10027053m.g N 0.000
cassava2216.valid.m1 Manihot esculenta cassava2216.valid.m1 N 0.000
cassava37607.valid.m1 Manihot esculenta cassava37607.valid.m1 N 0.000
Ca_12361 Cicer arietinum Ca_12361 N 0.000
Ciclev10012712m.g Citrus clementina Ciclev10012712m.g N 0.000
evm.TU.supercontig_71.62 Carica papaya evm.TU.supercontig_71.62 N 0.000
fgenesh2_kg.7__2515__AT4G17900.1 Arabidopsis lyrata fgenesh2_kg.7__2515__AT4G17900.1 N 0.000
GLYMA08G36641 Glycine max GLYMA08G36641 N 0.000
Gorai.003G183000 Gossypium raimondii Gorai.003G183000 N 0.000
Gorai.004G184500 Gossypium raimondii Gorai.004G184500 N 0.000
Gorai.006G217100 Gossypium raimondii Gorai.006G217100 N 0.000
Gorai.007G032400 Gossypium raimondii Gorai.007G032400 N 0.000
Gorai.008G226100 Gossypium raimondii Gorai.008G226100 N 0.000
LjSGA_028172.2 Lotus japonicus LjSGA_028172.2 N 0.000
Lus10000482.g Linum usitatissimum Lus10000482.g N 0.000
Lus10000952.g Linum usitatissimum Lus10000952.g N 0.000
Lus10002700.g Linum usitatissimum Lus10002700.g N 0.000
Lus10004577.g Linum usitatissimum Lus10004577.g N 0.000
Lus10020337.g Linum usitatissimum Lus10020337.g N 0.000
Lus10030968.g Linum usitatissimum Lus10030968.g N 0.000
Lus10040082.g Linum usitatissimum Lus10040082.g N 0.000
MDP0000553473 Malus domestica MDP0000553473 N 0.000
MDP0000570901 Malus domestica MDP0000570901 N 0.000
mgf002787m Mimulus guttatus mgf002787m N 0.000
mgf004069m Mimulus guttatus mgf004069m N 0.000
mgf006925m Mimulus guttatus mgf006925m N 0.000
mgf010773m Mimulus guttatus mgf010773m N 0.000
MTR_5g030130 Medicago truncatula MTR_5g030130 N 0.000
MTR_8g066820 Medicago truncatula MTR_8g066820 N 0.000
orange1.1g027730m.g Citrus sinensis orange1.1g027730m.g N 0.000
PGSC0003DMG400007670 Solanum tuberosum PGSC0003DMG400007670 N 0.000
PGSC0003DMG400009931 Solanum tuberosum PGSC0003DMG400009931 N 0.000
PGSC0003DMG400017518 Solanum tuberosum PGSC0003DMG400017518 N 0.000
PGSC0003DMG400017849 Solanum tuberosum PGSC0003DMG400017849 N 0.000
PK14253.1 Cannabis sativa PK14253.1 N 0.000
Pm022874 Prunus mume Pm022874 N 0.000
Pm023220 Prunus mume Pm023220 N 0.000
POPTR_0001s02390 Populus trichocarpa POPTR_0001s02390 N 0.000
PRUPE_ppa010445mg Prunus persica PRUPE_ppa010445mg N 0.000
PRUPE_ppa011266mg Prunus persica PRUPE_ppa011266mg N 0.000
scaffold_800157.1 Arabidopsis lyrata scaffold_800157.1 N 0.000
Solyc06g061240.2 Solanum lycopersicum Solyc06g061240.2 N 0.000
Solyc08g005100.2 Solanum lycopersicum Solyc08g005100.2 N 0.000
Solyc08g076860.2 Solanum lycopersicum Solyc08g076860.2 N 0.000
TCM_015701 Theobroma cacao TCM_015701 N 0.000
Thhalv10001013m.g Eutrema salsugineum Thhalv10001013m.g N 0.000
Thhalv10008750m.g Eutrema salsugineum Thhalv10008750m.g N 0.000
Thhalv10026159m.g Eutrema salsugineum Thhalv10026159m.g N 0.000
VIT_18s0122g00320 Vitis vinifera VIT_18s0122g00320 N 0.000