CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OBART08G03910
(
Oryza barthii
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04542 (Sigma70_r2)
IPR007627
OBART08G03910
T323893_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART08G03910.1
Sigma 70
207
277
LTMSNLRLVISIAQKYDNLGVELADLIQGGLIGLLRGIEKFDASRGFRISTYVYWWIRQGVSRALAENSKT
Links
Other
Sigma 70
family TFs
Other
Oryza barthii
TFs
73 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_02206
Capronia coronata
A1O1_02206
N
A1O7_04752
Cladophialophora yegresii
A1O7_04752
N
A1O9_09009
Exophiala aquamarina
A1O9_09009
N
GMDG_02930
Pseudogymnoascus destructans
GMDG_02930
N
HMPREF1120_03172
Exophiala dermatitidis
HMPREF1120_03172
N
PV04_04498
Capronia semiimmersa
PV04_04498
N
PV04_06132
Capronia semiimmersa
PV04_06132
N
PV05_01571
Exophiala xenobiotica
PV05_01571
N
PV05_06232
Exophiala xenobiotica
PV05_06232
N
PV05_09046
Exophiala xenobiotica
PV05_09046
N
PV06_06355
Exophiala oligosperma
PV06_06355
N
PV08_08642
Exophiala spinifera
PV08_08642
N
PV08_11643
Exophiala spinifera
PV08_11643
N
PV10_04391
Exophiala mesophila
PV10_04391
N
Z517_06419
Fonsecaea pedrosoi
Z517_06419
N
Z518_00819
Rhinocladiella mackenziei
Z518_00819
N
Z519_08473
Cladophialophora bantiana
Z519_08473
N