POPTR_0013s07290 (Populus trichocarpa)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 POPTR_0013s07290 T323958_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0013s07290.1 Sigma 70 260 330

Links

Other Sigma 70 family TFs
Other Populus trichocarpa TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_07437 Capronia coronata A1O1_07437 I
A1O3_08281 Capronia epimyces A1O3_08281 I
A1O5_04770 Cladophialophora psammophila A1O5_04770 N
A1O9_02783 Exophiala aquamarina A1O9_02783 I
ACRE_041000 Acremonium chrysogenum ACRE_041000 I
AOL_s00004g659 Arthrobotrys oligospora AOL_s00004g659 I
BAUCODRAFT_124151 Baudoinia compniacensis BAUCODRAFT_124151 I
BBA_03181 Beauveria bassiana BBA_03181 I
Bcin09g04000 Botrytis cinerea Bcin09g04000 I
BDDG_05952 Blastomyces dermatitidis BDDG_05952 I
BGHDH14_bgh05048 Blumeria graminis BGHDH14_bgh05048 I
CCM_04849 Cordyceps militaris CCM_04849 I
CFIO01_02960 Colletotrichum fioriniae CFIO01_02960 I
CH063_07646 Colletotrichum higginsianum CH063_07646 I
CHGG_06306 Chaetomium globosum CHGG_06306 I
CMQ_5498 Grosmannia clavigera CMQ_5498 I
Cob_05779 Colletotrichum orbiculare Cob_05779 I
COCC4DRAFT_123864 Bipolaris maydis COCC4DRAFT_123864 I
COCCADRAFT_81622 Bipolaris zeicola COCCADRAFT_81622 I
COCMIDRAFT_103312 Bipolaris oryzae COCMIDRAFT_103312 I
COCSADRAFT_207272 Bipolaris sorokiniana COCSADRAFT_207272 I
COCVIDRAFT_91551 Bipolaris victoriae COCVIDRAFT_91551 I
CPUR_04653 Claviceps purpurea CPUR_04653 I
CSUB01_11666 Colletotrichum sublineola CSUB01_11666 I
CTHT_0014240 Chaetomium thermophilum CTHT_0014240 I
DOTSEDRAFT_68386 Dothistroma septosporum DOTSEDRAFT_68386 I
EPUS_00352 Endocarpon pusillum EPUS_00352 I
estExt_fgenesh1_pg.C_20162 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_20162 I
estExt_fgenesh3_kg.C_70245 Neurospora discreta estExt_fgenesh3_kg.C_70245 I
EV44_g5656 Erysiphe necator EV44_g5656 I
e_gw1.1.1014.1 Mycosphaerella fijiensis e_gw1.1.1014.1 I
e_gw1.1.4254.1 Mycosphaerella graminicola e_gw1.1.4254.1 I
F503_03886 Ophiostoma piceae uamh F503_03886 I
FFUJ_04251 Fusarium fujikuroi FFUJ_04251 I
fgenesh1_pg.sca_18_chr2_1_0000868 Nectria haematococca fgenesh1_pg.sca_18_chr2_1_0000868 I
FGRRES_09410 Fusarium graminearum FGRRES_09410 I
FOXG_06083 Fusarium oxysporum FOXG_06083 I
FPSE_05112 Fusarium pseudograminearum FPSE_05112 I
GGTG_10332 Gaeumannomyces graminis GGTG_10332 I
GLRG_07822 Colletotrichum graminicola GLRG_07822 I
GMDG_02388 Pseudogymnoascus destructans GMDG_02388 I
GSTUM_00004702001 Tuber melanosporum GSTUM_00004702001 I
HMPREF1120_04884 Exophiala dermatitidis HMPREF1120_04884 I
HMPREF1541_04620 Cyphellophora europaea HMPREF1541_04620 I
HMPREF1624_04682 Sporothrix schenckii HMPREF1624_04682 I
LEMA_P041320.1 Leptosphaeria maculans LEMA_P041320.1 I
M437DRAFT_48363 Aureobasidium melanogenum M437DRAFT_48363 I
M438DRAFT_313334 Aureobasidium pullulans M438DRAFT_313334 I
MAC_06655 Metarhizium acridum MAC_06655 I
MAJ_03429 Metarhizium majus MAJ_03429 I
MANI_000776 Metarhizium anisopliae MANI_000776 I
MAPG_02496 Magnaporthe poae MAPG_02496 I
MBM_06471 Marssonina brunnea MBM_06471 I
MBR_06925 Metarhizium brunneum MBR_06925 I
MGG_12536 Magnaporthe oryzae MGG_12536 I
MPH_04617 Macrophomina phaseolina MPH_04617 I
MYCFIDRAFT_209985 Pseudocercospora fijiensis MYCFIDRAFT_209985 I
Mycgr3G31676 Zymoseptoria tritici Mycgr3G31676 I
MYCTH_2297579 Myceliophthora thermophila MYCTH_2297579 I
NCU03184 Neurospora crassa NCU03184 D
NechaG76677 Fusarium solani NechaG76677 I
NEUTE1DRAFT_126104 Neurospora tetrasperma NEUTE1DRAFT_126104 I
OIDMADRAFT_115397 Oidiodendron maius OIDMADRAFT_115397 I
PAAG_04503 Paracoccidioides sp lutzii PAAG_04503 I
PABG_04286 Paracoccidioides brasiliensis PABG_04286 I
PFICI_02997 Pestalotiopsis fici PFICI_02997 I
PMAA_092990 Penicillium marneffei PMAA_092990 I
PMAA_092990 Talaromyces marneffei PMAA_092990 I
PTRG_05588 Pyrenophora triticirepentis PTRG_05588 I
PTT_15591 Pyrenophora teres PTT_15591 I
PV05_10243 Exophiala xenobiotica PV05_10243 N
PV07_07040 Cladophialophora immunda PV07_07040 N
PV07_12305 Cladophialophora immunda PV07_12305 N
PV09_00302 Verruconis gallopava PV09_00302 I
PV10_05881 Exophiala mesophila PV10_05881 I
S40285_08790 Stachybotrys chlorohalonata S40285_08790 I
S40288_04756 Stachybotrys chartarum S40288_04756 I
SAPIO_CDS10068 Scedosporium apiospermum SAPIO_CDS10068 I
SBOR_4818 Sclerotinia borealis SBOR_4818 I
SEPMUDRAFT_77933 Sphaerulina musiva SEPMUDRAFT_77933 I
SETTUDRAFT_125422 Setosphaeria turcica SETTUDRAFT_125422 I
SMAC_02906 Sordaria macrospora SMAC_02906 I
SNOG_07718 Stagonospora nodorum SNOG_07718 I
SPBR_05957 Sporothrix brasiliensis SPBR_05957 I
THITE_2112134 Thielavia terrestris THITE_2112134 I
TRIATDRAFT_41152 Trichoderma atroviride TRIATDRAFT_41152 I
TRIREDRAFT_4921 Trichoderma reesei TRIREDRAFT_4921 I
TRIVIDRAFT_57749 Trichoderma virens TRIVIDRAFT_57749 I
UCRNP2_8268 Neofusicoccum parvum UCRNP2_8268 I
VDAG_01718 Verticillium dahliae VDAG_01718 I
VDBG_01834 Verticillium alfalfae VDBG_01834 I
VDBG_01834 Verticillium albo atrum VDBG_01834 I
VHEMI06571 Torrubiella hemipterigena VHEMI06571 I
W97_05560 Coniosporium apollinis W97_05560 I
X797_008515 Metarhizium robertsii X797_008515 I