DAPPUDRAFT_314805 (Daphnia pulex)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 DAPPUDRAFT_314805 T324445_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smad3
M00192_2.00 		Mus musculus
NNNNNMGMCN
NGKCKNNNNN		 PBM
Badis et al.(2009)
Smad3_3805 		0.822 0.822
SMAD3
M03482_2.00 		Homo sapiens
YGTCTAGACA
TGTCTAGACR		 SELEX
Jolma et al.(2013)
SMAD3_1 		0.822 0.822
SMAD3
M09380_2.00 		Homo sapiens
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B 		0.822 0.822
Smad3
M09384_2.00 		Mus musculus
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B 		0.822 0.822
Smad3
M09637_2.00 		Mus musculus
BYAGMCWN
NWGKCTRV		 Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673 		0.822 0.822
SMAD3
M11283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_01 		0.822 0.822
SMAD3
M11284_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_02 		0.822 0.822
SMAD3
M11285_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6 		0.822 0.822
SMAD9
M11274_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_01 		0.713 0.713
Smad9
M11290_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_02 		0.713 0.713
Smad9
M11289_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_03 		0.713 0.713
Mad
M06446_2.00 		Drosophila melanogaster
GYGHCGBCVS
SBGVCGDCRC		 B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648 		0.703 0.703
Mad
M08427_2.00 		Drosophila melanogaster
SNGRCGMSRVSRBNS
SNVYSBYSKCGYCNS		 ChIP-chip
Mathelier et al.(2014)
MA0535.1 		0.703 0.703
Mad
M09692_2.00 		Drosophila melanogaster
KCBGSHGKCGCSNC
GNSGCGMCDSCVGM		 Misc
Kulakovskiy et al.(2009)
Mad 		0.703 0.703
Mad
M11293_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$MAD_Q6 		0.703 0.703
Smad5
M11288_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_01 		0.703 0.703
Smad5
M11292_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_03 		0.703 0.703
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFX84472 SMAD 27 127

Links

Other SMAD family TFs
Other Daphnia pulex TFs

240 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAB39329 Xenopus laevis AAB39329 I 0.842
AALB000402 Anopheles albimanus AALB000402 I 0.703
Aan_R002236 Calypte anna Aan_R002236 I 0.842
Aan_R005227 Calypte anna Aan_R005227 I 0.703
Aan_R005610 Calypte anna Aan_R005610 I 0.832
ACEP23524 Atta cephalotes ACEP23524 I 0.868
ACUA017601 Anopheles culicifacies ACUA017601 I 0.703
ACUA022001 Anopheles culicifacies ACUA022001 I 0.703
ADAC002355 Anopheles darlingi ADAC002355 I 0.703
AEPI001857 Anopheles epiroticus AEPI001857 I 0.703
Afo_R003117 Aptenodytes forsteri Afo_R003117 I 0.703
Afo_R015053 Aptenodytes forsteri Afo_R015053 I 0.832
AFUN010580 Anopheles funestus AFUN010580 I 0.703
Alligator_sinensis_CCG004626.1 Alligator sinensis Alligator_sinensis_CCG004626.1 I 0.720
Alligator_sinensis_CCG012577.1 Alligator sinensis Alligator_sinensis_CCG012577.1 I 0.703
AMIN001006 Anopheles minimus AMIN001006 I 0.703
A_03775 Schistosoma haematobium A_03775 N 0.713
BGLB001215 Biomphalaria glabrata BGLB001215 I 0.723
BGLB010651 Biomphalaria glabrata BGLB010651 I 0.723
Brh_R001114 Buceros rhinoceros Brh_R001114 I 0.789
Brh_R001115 Buceros rhinoceros Brh_R001115 I 0.857
Brh_R009512 Buceros rhinoceros Brh_R009512 I 0.703
CapteG167863 Capitella teleta CapteG167863 I 0.822
CGI_10014747 Crassostrea gigas CGI_10014747 I 0.723
CGI_10017370 Crassostrea gigas CGI_10017370 I 0.812
CPIJ000420 Culex quinquefasciatus CPIJ000420 I 0.703
CpipJ_CPIJ000420 Culex pipiens CpipJ_CPIJ000420 I 0.703
D917_04509 Trichinella nativa D917_04509 I 0.733
D918_09504 Trichuris suis D918_09504 I 0.743
DAPPUDRAFT_300607 Daphnia pulex DAPPUDRAFT_300607 I 0.723
ECANG7_02014 Echinococcus canadensis ECANG7_02014 N 0.713
EFV60166 Trichinella spiralis EFV60166 I 0.733
EmuJ_001054200 Echinococcus multilocularis EmuJ_001054200 N 0.713
ENSAMEG00000003318 Ailuropoda melanoleuca ENSAMEG00000003318 I 0.822
ENSAMEG00000014442 Ailuropoda melanoleuca ENSAMEG00000014442 I 0.713
ENSAMXG00000002880 Astyanax mexicanus ENSAMXG00000002880 I 0.822
ENSAMXG00000010992 Astyanax mexicanus ENSAMXG00000010992 I 0.706
ENSAPLG00000004964 Anas platyrhynchos ENSAPLG00000004964 I 0.875
ENSAPLG00000007006 Anas platyrhynchos ENSAPLG00000007006 I 0.857
ENSAPLG00000009135 Anas platyrhynchos ENSAPLG00000009135 I 0.703
ENSAPLG00000011496 Anas platyrhynchos ENSAPLG00000011496 I 0.763
ENSBTAP00000003668-D4 Bos grunniens ENSBTAP00000003668-D4 I 0.842
ENSBTAP00000029021-D3 Bos grunniens ENSBTAP00000029021-D3 I 0.713
ENSCING00000006188 Ciona intestinalis ENSCING00000006188 I 0.782
ENSCSAG00000013275 Chlorocebus sabaeus ENSCSAG00000013275 I 0.822
ENSCSAG00000017872 Chlorocebus sabaeus ENSCSAG00000017872 I 0.713
ENSCSAVG00000004749 Ciona savignyi ENSCSAVG00000004749 I 0.782
ENSFALG00000008280 Ficedula albicollis ENSFALG00000008280 I 0.703
ENSFALG00000012861 Ficedula albicollis ENSFALG00000012861 I 0.822
ENSGACG00000017820 Gasterosteus aculeatus ENSGACG00000017820 I 0.802
ENSGALG00000007870 Gallus gallus ENSGALG00000007870 I 0.832
ENSGALG00000014184 Gallus gallus ENSGALG00000014184 I 0.842
ENSGMOG00000001314 Gadus morhua ENSGMOG00000001314 I 0.789
ENSGMOG00000008364 Gadus morhua ENSGMOG00000008364 I 0.802
ENSLACG00000011178 Latimeria chalumnae ENSLACG00000011178 I 0.703
ENSLOCG00000008877 Lepisosteus oculatus ENSLOCG00000008877 I 0.703
ENSLOCG00000011514 Lepisosteus oculatus ENSLOCG00000011514 I 0.706
ENSLOCG00000013897 Lepisosteus oculatus ENSLOCG00000013897 I 0.832
ENSMEUG00000007556 Macropus eugenii ENSMEUG00000007556 I 0.703
ENSMGAG00000001351 Meleagris gallopavo ENSMGAG00000001351 I 0.875
ENSMPUG00000001838 Mustela putorius furo ENSMPUG00000001838 I 0.713
ENSNLEG00000001639 Nomascus leucogenys ENSNLEG00000001639 I 0.713
ENSNLEG00000012983 Nomascus leucogenys ENSNLEG00000012983 I 0.822
ENSONIG00000004109 Oreochromis niloticus ENSONIG00000004109 I 0.812
ENSONIG00000013271 Oreochromis niloticus ENSONIG00000013271 I 0.832
ENSONIG00000015464 Oreochromis niloticus ENSONIG00000015464 I 0.802
ENSORLG00000011834 Oryzias latipes ENSORLG00000011834 I 0.822
ENSP00000332973 Macaca fascicularis ENSP00000332973 I 0.772
ENSP00000332973-D1 Bos grunniens ENSP00000332973-D1 I 0.822
ENSP00000382216 Macaca fascicularis ENSP00000382216 I 0.713
ENSPANG00000014460 Papio anubis ENSPANG00000014460 I 0.713
ENSPANG00000016627 Papio anubis ENSPANG00000016627 I 0.822
ENSPFOG00000002285 Poecilia formosa ENSPFOG00000002285 I 0.812
ENSPFOG00000004885 Poecilia formosa ENSPFOG00000004885 I 0.822
ENSPFOG00000005752 Poecilia formosa ENSPFOG00000005752 I 0.703
ENSPFOG00000006336 Poecilia formosa ENSPFOG00000006336 I 0.842
ENSPFOG00000008802 Poecilia formosa ENSPFOG00000008802 I 0.782
ENSPMAG00000000489 Petromyzon marinus ENSPMAG00000000489 I 0.851
ENSPMAG00000009833 Petromyzon marinus ENSPMAG00000009833 I 0.723
ENSPPYG00000005285 Pongo abelii ENSPPYG00000005285 I 0.716
ENSPPYG00000006583 Pongo abelii ENSPPYG00000006583 I 0.822
ENSPSIG00000002483 Pelodiscus sinensis ENSPSIG00000002483 I 0.703
ENSPSIG00000010579 Pelodiscus sinensis ENSPSIG00000010579 I 0.857
ENSSHAG00000001186 Sarcophilus harrisii ENSSHAG00000001186 I 0.703
ENSSHAG00000012543 Sarcophilus harrisii ENSSHAG00000012543 I 0.726
ENSSTOG00000003788 Ictidomys tridecemlineatus ENSSTOG00000003788 I 0.842
ENSSTOG00000007103 Ictidomys tridecemlineatus ENSSTOG00000007103 I 0.713
ENSSTOG00000010286 Ictidomys tridecemlineatus ENSSTOG00000010286 I 0.822
ENSTBEG00000003884 Tupaia belangeri ENSTBEG00000003884 I 0.792
ENSTNIG00000004827 Tetraodon nigroviridis ENSTNIG00000004827 I 0.802
ENSTSYG00000005021 Tarsius syrichta ENSTSYG00000005021 I 0.713
ENSXMAG00000002377 Xiphophorus maculatus ENSXMAG00000002377 I 0.832
ENSXMAG00000003553 Xiphophorus maculatus ENSXMAG00000003553 I 0.782
ENSXMAG00000004505 Xiphophorus maculatus ENSXMAG00000004505 I 0.812
ENSXMAG00000016280 Xiphophorus maculatus ENSXMAG00000016280 I 0.703
estExt_fgenesh2_pg.C_1720042 Branchiostoma floridae estExt_fgenesh2_pg.C_1720042 I 0.842
estExt_gwp.C_540260 Branchiostoma floridae estExt_gwp.C_540260 I 0.842
GA28973 Drosophila pseudoobscura FBgn0250331 I 0.703
GB42213 Apis mellifera GB42213 N 0.710
GD22774 Drosophila simulans FBgn0194168 I 0.703
GE14935 Drosophila yakuba FBgn0232525 I 0.703
GF20577 Drosophila ananassae FBgn0097583 I 0.703
Gfo_R005758 Geospiza fortis Gfo_R005758 I 0.703
Gfo_R005908 Geospiza fortis Gfo_R005908 I 0.822
Gfo_R012055 Geospiza fortis Gfo_R012055 I 0.851
GG24457 Drosophila erecta FBgn0116589 I 0.703
GH10284 Drosophila grimshawi FBgn0117765 I 0.703
GI17981 Drosophila mojavensis FBgn0140721 I 0.703
GJ19553 Drosophila virilis FBgn0206695 I 0.703
GK18268 Drosophila willistoni FBgn0220267 I 0.703
GL26531 Drosophila persimilis FBgn0164113 I 0.703
GM18164 Drosophila sechellia FBgn0173071 I 0.703
HDID_0000518601 Hymenolepis diminuta HDID_0000518601 N 0.723
HelroG185435 Helobdella robusta HelroG185435 I 0.782
HelroG186716 Helobdella robusta HelroG186716 I 0.703
HMEL009295 Heliconius melpomene HMEL009295 I 0.703
HmN_000552800 Hymenolepis microstoma HmN_000552800 N 0.723
HNAJ_0001138301 Hymenolepis nana HNAJ_0001138301 N 0.723
ISCW001846 Ixodes scapularis ISCW001846 I 0.832
ISCW010869 Ixodes scapularis ISCW010869 I 0.706
KGM_04785 Danaus plexippus KGM_04785 I 0.703
L798_03803 Zootermopsis nevadensis L798_03803 I 0.703
L798_14024 Zootermopsis nevadensis L798_14024 I 0.861
LCUP000453 Lucilia cuprina LCUP000453 I 0.703
LDEC003904 Leptinotarsa decemlineata LDEC003904 I 0.703
LDEC015977 Leptinotarsa decemlineata LDEC015977 I 0.720
LLOJ009024 Lutzomyia longipalpis LLOJ009024 I 0.703
LOC103691556 Rattus norvegicus ENSRNOG00000058416 I 0.713
LotgiG104873 Lottia gigantea LotgiG104873 I 0.723
LotgiG189014 Lottia gigantea LotgiG189014 I 0.792
Mad Drosophila melanogaster FBgn0011648 D 0.703
MDOA012257 Musca domestica MDOA012257 I 0.703
MDOA015236 Musca domestica MDOA015236 I 0.703
ML011743a Mnemiopsis leidyi ML011743a I 0.830
Myotis_brandtii_Smad3_10022298 Myotis brandtii Myotis_brandtii_Smad3_10022298 I 0.822
Myotis_brandtii_SMAD9_10010468 Myotis brandtii Myotis_brandtii_SMAD9_10010468 I 0.713
NEMVEDRAFT_v1g168041 Nematostella vectensis NEMVEDRAFT_v1g168041 I 0.792
NEMVEDRAFT_v1g228395 Nematostella vectensis NEMVEDRAFT_v1g228395 I 0.723
NV10880 Nasonia vitripennis NV10880 I 0.772
NV15769 Nasonia vitripennis NV15769 I 0.716
Ocbimv22002448m.g Octopus bimaculoides Ocbimv22002448m.g I 0.706
Ogr17529 Ophisaurus gracilis Ogr17529 I 0.706
PHUM033930 Pediculus humanus PHUM033930 I 0.743
PPAI005080 Phlebotomus papatasi PPAI005080 I 0.718
PPAI007902 Phlebotomus papatasi PPAI007902 I 0.703
Pvit_04328 Pogona vitticeps Pvit_04328 I 0.703
RPRC003748 Rhodnius prolixus RPRC003748 N 0.713
Sakowv30001252m.g Saccoglossus kowalevskii Sakowv30001252m.g I 0.713
SCUD_0002067401 Schistosoma curassoni SCUD_0002067401 N 0.713
Sjc_0068210 Schistosoma japonicum Sjc_0068210 N 0.703
SMAD1 Choloepus hoffmanni ENSCHOG00000009259 I 0.703
smad1.S Xenopus laevis XB-GENE-6253892 I 0.703
SMAD2 Sorex araneus ENSSARG00000003487 I 0.842
smad2.S Xenopus laevis XB-GENE-864923 I 0.832
SMAD3 Canis familiaris ENSCAFG00000017388 I 0.822
SMAD3 Choloepus hoffmanni ENSCHOG00000001562 I 0.806
SMAD3 Callithrix jacchus ENSCJAG00000002088 I 0.822
SMAD3 Cavia porcellus ENSCPOG00000021314 I 0.832
SMAD3 Dasypus novemcinctus ENSDNOG00000044090 I 0.822
SMAD3 Echinops telfairi ENSETEG00000003356 I 0.832
SMAD3 Homo sapiens ENSG00000166949 D 0.828
SMAD3 Meleagris gallopavo ENSMGAG00000009879 I 0.795
SMAD3 Microcebus murinus ENSMICG00000006119 I 0.822
SMAD3 Macaca mulatta ENSMMUG00000015455 I 0.822
SMAD3 Monodelphis domestica ENSMODG00000009609 I 0.822
Smad3 Mus musculus ENSMUSG00000032402 D 0.822
SMAD3 Otolemur garnettii ENSOGAG00000014217 I 0.822
SMAD3 Ochotona princeps ENSOPRG00000014996 I 0.822
SMAD3 Procavia capensis ENSPCAG00000008103 I 0.812
SMAD3 Pan troglodytes ENSPTRG00000007199 I 0.822
SMAD3 Pteropus vampyrus ENSPVAG00000002626 I 0.822
Smad3 Rattus norvegicus ENSRNOG00000008620 I 0.822
SMAD3 Taeniopygia guttata ENSTGUG00000009470 I 0.703
smad3 Xenopus tropicalis XB-GENE-481992 I 0.861
smad3.L Xenopus laevis XB-GENE-864816 I 0.861
smad3a Danio rerio ENSDARG00000036096 I 0.832
smad3a Oryzias latipes ENSORLG00000002207 I 0.842
smad3a Tetraodon nigroviridis ENSTNIG00000009546 I 0.842
smad3a Takifugu rubripes ENSTRUG00000016858 I 0.842
smad3b Danio rerio ENSDARG00000010207 I 0.812
smad3b Gasterosteus aculeatus ENSGACG00000005092 I 0.822
smad3b Oryzias latipes ENSORLG00000006803 I 0.792
smad3b Tetraodon nigroviridis ENSTNIG00000008432 I 0.822
smad3b Takifugu rubripes ENSTRUG00000014802 I 0.822
smad5 Danio rerio ENSDARG00000037238 I 0.706
smad5 Gasterosteus aculeatus ENSGACG00000018718 I 0.703
SMAD5 Ornithorhynchus anatinus ENSOANG00000009906 I 0.703
smad5 Tetraodon nigroviridis ENSTNIG00000003701 I 0.703
smad5 Takifugu rubripes ENSTRUG00000001329 I 0.703
SMAD9 Anolis carolinensis ENSACAG00000004463 I 0.703
SMAD9 Bos taurus ENSBTAG00000007589 I 0.713
SMAD9 Canis familiaris ENSCAFG00000006162 I 0.713
SMAD9 Cavia porcellus ENSCPOG00000010255 I 0.716
smad9 Danio rerio ENSDARG00000021938 I 0.703
SMAD9 Dasypus novemcinctus ENSDNOG00000048385 I 0.703
Smad9 Dipodomys ordii ENSDORG00000002526 I 0.713
SMAD9 Equus caballus ENSECAG00000012534 I 0.713
SMAD9 Echinops telfairi ENSETEG00000020236 I 0.713
SMAD9 Felis catus ENSFCAG00000003813 I 0.713
SMAD9 Homo sapiens ENSG00000120693 D 0.713
SMAD9 Gallus gallus ENSGALG00000017050 I 0.703
SMAD9 Gorilla gorilla ENSGGOG00000001017 I 0.713
SMAD9 Loxodonta africana ENSLAFG00000002903 I 0.713
SMAD9 Meleagris gallopavo ENSMGAG00000015060 I 0.703
SMAD9 Microcebus murinus ENSMICG00000003343 I 0.713
SMAD9 Myotis lucifugus ENSMLUG00000006399 I 0.713
SMAD9 Macaca mulatta ENSMMUG00000009914 I 0.713
SMAD9 Monodelphis domestica ENSMODG00000010017 I 0.703
Smad9 Mus musculus ENSMUSG00000027796 D 0.713
SMAD9 Ornithorhynchus anatinus ENSOANG00000015497 I 0.703
SMAD9 Oryctolagus cuniculus ENSOCUG00000007453 I 0.713
SMAD9 Otolemur garnettii ENSOGAG00000002742 I 0.713
SMAD9 Ochotona princeps ENSOPRG00000004923 I 0.713
SMAD9 Procavia capensis ENSPCAG00000002604 I 0.713
SMAD9 Pan troglodytes ENSPTRG00000005788 I 0.713
SMAD9 Pteropus vampyrus ENSPVAG00000013871 I 0.713
Smad9 Rattus norvegicus ENSRNOG00000000091 D 0.713
SMAD9 Sorex araneus ENSSARG00000011878 I 0.713
SMAD9 Sus scrofa ENSSSCG00000009357 I 0.713
SMAD9 Tupaia belangeri ENSTBEG00000011491 I 0.713
SMAD9 Taeniopygia guttata ENSTGUG00000011897 I 0.703
SMAD9 Tursiops truncatus ENSTTRG00000007903 I 0.713
SMAR008230 Strigamia maritima SMAR008230 I 0.881
SMAR012602 Strigamia maritima SMAR012602 I 0.723
Smp_085910 Schistosoma mansoni Smp_085910 N 0.713
SPU_017642 Strongylocentrotus purpuratus SPU_017642 I 0.842
SPU_020722 Strongylocentrotus purpuratus SPU_020722 I 0.713
SPU_023107 Strongylocentrotus purpuratus SPU_023107 I 0.713
Tal_R001210 Tyto alba Tal_R001210 I 0.857
Tal_R004657 Tyto alba Tal_R004657 I 0.703
Tal_R011237 Tyto alba Tal_R011237 I 0.763
TASK_0000169301 Taenia asiatica TASK_0000169301 N 0.723
TMUE_s0005013500 Trichuris muris TMUE_s0005013500 I 0.733
TriadG49742 Trichoplax adhaerens TriadG49742 I 0.782
TriadG50301 Trichoplax adhaerens TriadG50301 I 0.723
TsM_001161100 Taenia solium TsM_001161100 N 0.723
TTAC_0000253501 Hydatigera taeniaeformis TTAC_0000253501 N 0.723
TTRE_0000192701 Trichuris trichiura TTRE_0000192701 I 0.743
XP_002157279.1 Hydra magnipapillata XP_002157279.1 I 0.775
XP_002160208.1 Hydra magnipapillata XP_002160208.1 I 0.723