HelroG186716 (Helobdella robusta)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 HelroG186716 T325114_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smad5
M11288_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_01 		0.882 0.882
Smad5
M11292_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_03 		0.882 0.882
SMAD1
M11286_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_01 		0.873 0.873
SMAD1
M11287_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_Q6 		0.873 0.873
SMAD9
M11274_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_01 		0.873 0.873
Smad9
M11290_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_02 		0.873 0.873
Smad9
M11289_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_03 		0.873 0.873
Mad
M06446_2.00 		Drosophila melanogaster
GYGHCGBCVS
SBGVCGDCRC		 B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648 		0.843 0.843
Mad
M08427_2.00 		Drosophila melanogaster
SNGRCGMSRVSRBNS
SNVYSBYSKCGYCNS		 ChIP-chip
Mathelier et al.(2014)
MA0535.1 		0.843 0.843
Mad
M09692_2.00 		Drosophila melanogaster
KCBGSHGKCGCSNC
GNSGCGMCDSCVGM		 Misc
Kulakovskiy et al.(2009)
Mad 		0.843 0.843
Mad
M11293_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$MAD_Q6 		0.843 0.843
Smad3
M00192_2.00 		Mus musculus
NNNNNMGMCN
NGKCKNNNNN		 PBM
Badis et al.(2009)
Smad3_3805 		0.716 0.716
SMAD3
M03482_2.00 		Homo sapiens
YGTCTAGACA
TGTCTAGACR		 SELEX
Jolma et al.(2013)
SMAD3_1 		0.716 0.716
SMAD3
M09380_2.00 		Homo sapiens
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B 		0.716 0.716
Smad3
M09384_2.00 		Mus musculus
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B 		0.716 0.716
Smad3
M09637_2.00 		Mus musculus
BYAGMCWN
NWGKCTRV		 Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673 		0.716 0.716
SMAD3
M11283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_01 		0.716 0.716
SMAD3
M11284_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_02 		0.716 0.716
SMAD3
M11285_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6 		0.716 0.716
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HelroP186716 SMAD 35 136

Links

Other SMAD family TFs
Other Helobdella robusta TFs

505 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30076.m004607 Ricinus communis 30076.m004607 I
AMTR_s00145p00098450 Amborella trichopoda AMTR_s00145p00098450 I
AMTR_s01267p00006490 Amborella trichopoda AMTR_s01267p00006490 I
Aquca_002_00902 Aquilegia coerulea Aquca_002_00902 I
Aquca_025_00059 Aquilegia coerulea Aquca_025_00059 I
Aquca_030_00038 Aquilegia coerulea Aquca_030_00038 I
ATMYB121 Arabidopsis thaliana AT3G30210 D
ATMYB121 Arabidopsis lyrata fgenesh2_kg.5__710__AT3G30210.1 I
AtMYB27 Arabidopsis lyrata fgenesh2_kg.5__1687__AT3G53200.1 I
AtMYB27 Populus trichocarpa POPTR_0006s12400 N
AtMYB79 Arabidopsis thaliana AT4G13480 I
BGIOSGA005283 Oryza indica BGIOSGA005283 I
BGIOSGA019054 Oryza indica BGIOSGA019054 I
BGIOSGA035986 Oryza indica BGIOSGA035986 I
BGIOSGA035999 Oryza indica BGIOSGA035999 I
Bo1g098860 Brassica oleracea Bo1g098860 I
Bo3g083130 Brassica oleracea Bo3g083130 I
Bo6g067190 Brassica oleracea Bo6g067190 I
Bo7g033260 Brassica oleracea Bo7g033260 I
Bo7g088650 Brassica oleracea Bo7g088650 I
Bo8g082570 Brassica oleracea Bo8g082570 I
Bo9g009020 Brassica oleracea Bo9g009020 I
Bostr.0556s0619 Boechera stricta Bostr.0556s0619 I
Bostr.15654s0036 Boechera stricta Bostr.15654s0036 I
Bostr.19424s0195 Boechera stricta Bostr.19424s0195 I
Bostr.2021s0106 Boechera stricta Bostr.2021s0106 I
Bostr.9544s0002 Boechera stricta Bostr.9544s0002 I
Bra001941 Brassica rapa Bra001941 I
Bra006977 Brassica rapa Bra006977 I
Bra015029 Brassica rapa Bra015029 I
Bra025410 Brassica rapa Bra025410 I
Bra028369 Brassica rapa Bra028369 I
Bra028550 Brassica rapa Bra028550 I
BRADI2G62510 Brachypodium distachyon BRADI2G62510 I
BRADI4G04050 Brachypodium distachyon BRADI4G04050 I
BRADI4G09900 Brachypodium distachyon BRADI4G09900 I
Cagra.0454s0003 Capsella grandiflora Cagra.0454s0003 I
Cagra.0612s0043 Capsella grandiflora Cagra.0612s0043 I
Cagra.1138s0003 Capsella grandiflora Cagra.1138s0003 I
Cagra.15509s0001 Capsella grandiflora Cagra.15509s0001 I
Carubv10007255m.g Capsella rubella Carubv10007255m.g I
Carubv10010143m.g Capsella rubella Carubv10010143m.g I
Carubv10014367m.g Capsella rubella Carubv10014367m.g I
Carubv10018530m.g Capsella rubella Carubv10018530m.g I
Carubv10019409m.g Capsella rubella Carubv10019409m.g I
cassava15759.m1 Manihot esculenta cassava15759.m1 N
cassava24389.valid.m1 Manihot esculenta cassava24389.valid.m1 I
cassava24463.valid.m1 Manihot esculenta cassava24463.valid.m1 I
cassava9891.m1 Manihot esculenta cassava9891.m1 I
Ca_07872 Cicer arietinum Ca_07872 I
Ca_20437 Cicer arietinum Ca_20437 I
Ciclev10006914m.g Citrus clementina Ciclev10006914m.g I
Ciclev10013466m.g Citrus clementina Ciclev10013466m.g I
Cla007745 Citrullus lanatus Cla007745 I
Cla021798 Citrullus lanatus Cla021798 I
Cucsa.255900 Cucumis sativus Cucsa.255900 I
Cucsa.306580 Cucumis sativus Cucsa.306580 N
Cucsa.383230 Cucumis sativus Cucsa.383230 I
Eucgr.A01648 Eucalyptus grandis Eucgr.A01648 I
Eucgr.H02896 Eucalyptus grandis Eucgr.H02896 I
Eucgr.I02057 Eucalyptus grandis Eucgr.I02057 I
Eucgr.K03562 Eucalyptus grandis Eucgr.K03562 I
evm.TU.supercontig_59.23 Carica papaya evm.TU.supercontig_59.23 I
evm.TU.supercontig_92.99 Carica papaya evm.TU.supercontig_92.99 I
F775_06315 Aegilops tauschii F775_06315 I
F775_14172 Aegilops tauschii F775_14172 I
F775_29427 Aegilops tauschii F775_29427 I
fgenesh2_kg.3__2645__AT3G24310.1 Arabidopsis lyrata fgenesh2_kg.3__2645__AT3G24310.1 I
fgenesh2_kg.9__1__AT4G13480.1 Arabidopsis lyrata fgenesh2_kg.9__1__AT4G13480.1 I
gene09683-v1.0-hybrid Fragaria vesca gene09683-v1.0-hybrid I
gene28293-v1.0-hybrid Fragaria vesca gene28293-v1.0-hybrid I
GLYMA04G26650 Glycine max GLYMA04G26650 I
GLYMA06G38340 Glycine max GLYMA06G38340 I
GLYMA10G06680 Glycine max GLYMA10G06680 N
GLYMA10G26681 Glycine max GLYMA10G26681 I
GLYMA10G33450 Glycine max GLYMA10G33450 I
GLYMA15G14190 Glycine max GLYMA15G14190 I
GLYMA17G17560 Glycine max GLYMA17G17560 I
GLYMA20G20980 Glycine max GLYMA20G20980 I
GLYMA20G34140 Glycine max GLYMA20G34140 I
Gorai.001G207500 Gossypium raimondii Gorai.001G207500 I
Gorai.005G054900 Gossypium raimondii Gorai.005G054900 I
Gorai.006G073500 Gossypium raimondii Gorai.006G073500 I
Gorai.006G254200 Gossypium raimondii Gorai.006G254200 I
Gorai.007G121000 Gossypium raimondii Gorai.007G121000 I
Gorai.008G137300 Gossypium raimondii Gorai.008G137300 I
Gorai.009G413600 Gossypium raimondii Gorai.009G413600 I
GRMZM2G013581 Zea mays GRMZM2G013581 N
GRMZM2G047626 Zea mays GRMZM2G047626 I
GRMZM2G048136 Zea mays GRMZM2G048136 I
GRMZM2G130149 Zea mays GRMZM2G130149 I
GRMZM2G131442 Zea mays GRMZM2G131442 I
GRMZM2G143046 Zea mays GRMZM2G143046 I
GRMZM2G160840 Zea mays GRMZM2G160840 I
GRMZM2G305856 Zea mays GRMZM2G305856 I
GSMUA_Achr10G03710_001 Musa acuminata GSMUA_Achr10G03710_001 I
GSMUA_Achr10G13520_001 Musa acuminata GSMUA_Achr10G13520_001 I
GSMUA_Achr11G04930_001 Musa acuminata GSMUA_Achr11G04930_001 I
GSMUA_Achr11G24690_001 Musa acuminata GSMUA_Achr11G24690_001 I
GSMUA_Achr1G24960_001 Musa acuminata GSMUA_Achr1G24960_001 I
GSMUA_Achr2G16200_001 Musa acuminata GSMUA_Achr2G16200_001 I
GSMUA_Achr5G28350_001 Musa acuminata GSMUA_Achr5G28350_001 I
GSMUA_Achr6G15370_001 Musa acuminata GSMUA_Achr6G15370_001 I
GSMUA_Achr7G18200_001 Musa acuminata GSMUA_Achr7G18200_001 I
GSMUA_Achr8G02640_001 Musa acuminata GSMUA_Achr8G02640_001 I
GSMUA_Achr8G34340_001 Musa acuminata GSMUA_Achr8G34340_001 I
GSMUA_Achr9G28370_001 Musa acuminata GSMUA_Achr9G28370_001 I
JAMYB Oryza sativa OS11G0684000 I
LPERR01G40120 Leersia perrieri LPERR01G40120 I
LPERR05G01030 Leersia perrieri LPERR05G01030 I
LPERR12G13390 Leersia perrieri LPERR12G13390 I
Lus10005079.g Linum usitatissimum Lus10005079.g I
Lus10014415.g Linum usitatissimum Lus10014415.g N
Lus10014453.g Linum usitatissimum Lus10014453.g I
Lus10023711.g Linum usitatissimum Lus10023711.g I
Lus10023918.g Linum usitatissimum Lus10023918.g N
Lus10034372.g Linum usitatissimum Lus10034372.g I
MDP0000133412 Malus domestica MDP0000133412 I
MDP0000183451 Malus domestica MDP0000183451 I
MDP0000286143 Malus domestica MDP0000286143 I
MDP0000823458 Malus domestica MDP0000823458 I
mgf004640m Mimulus guttatus mgf004640m I
MLOC_52439 Hordeum vulgare MLOC_52439 I
MTR_1g045610 Medicago truncatula MTR_1g045610 I
MTR_1g062940 Medicago truncatula MTR_1g062940 N
MTR_1g073170 Medicago truncatula MTR_1g073170 I
MYB112 Arabidopsis thaliana AT1G48000 I
MYB112 Arabidopsis lyrata fgenesh2_kg.1__3889__AT1G48000.1 I
MYB27 Arabidopsis thaliana AT3G53200 D
MYB305 Arabidopsis thaliana AT3G24310 I
MYBAS2 Oryza sativa OS12G0567300 I
OB01G54920 Oryza brachyantha OB01G54920 I
OB05G11070 Oryza brachyantha OB05G11070 I
OB07G32480 Oryza brachyantha OB07G32480 I
OB11G27320 Oryza brachyantha OB11G27320 I
OB11G27690 Oryza brachyantha OB11G27690 I
OB12G22880 Oryza brachyantha OB12G22880 I
OB12G23080 Oryza brachyantha OB12G23080 I
OBART01G45730 Oryza barthii OBART01G45730 I
OBART05G01080 Oryza barthii OBART05G01080 I
OGLUM05G01090 Oryza glumaepatula OGLUM05G01090 I
OLONG_004480 Oryza longistaminata OLONG_004480 I
OMERI05G01150 Oryza meridionalis OMERI05G01150 I
ONIVA05G01120 Oryza nivara ONIVA05G01120 I
OPUNC01G44650 Oryza punctata OPUNC01G44650 I
OPUNC05G00970 Oryza punctata OPUNC05G00970 I
orange1.1g044161m.g Citrus sinensis orange1.1g044161m.g I
orange1.1g047839m.g Citrus sinensis orange1.1g047839m.g I
orange1.1g047854m.g Citrus sinensis orange1.1g047854m.g I
ORGLA01G0394700 Oryza glaberrima ORGLA01G0394700 I
ORGLA12G0140200 Oryza glaberrima ORGLA12G0140200 I
ORGLA12G0141600 Oryza glaberrima ORGLA12G0141600 I
ORGLA12G0206100 Oryza glaberrima ORGLA12G0206100 I
ORUFI01G49220 Oryza rufipogon ORUFI01G49220 I
ORUFI05G01110 Oryza rufipogon ORUFI05G01110 I
ORUFI11G24630 Oryza rufipogon ORUFI11G24630 I
ORUFI12G17730 Oryza rufipogon ORUFI12G17730 I
ORUFI12G17930 Oryza rufipogon ORUFI12G17930 I
Pavir.Ca00653 Panicum virgatum Pavir.Ca00653 I
Pavir.Ca00655 Panicum virgatum Pavir.Ca00655 I
Pavir.Ca02588 Panicum virgatum Pavir.Ca02588 I
Pavir.Cb00499 Panicum virgatum Pavir.Cb00499 I
Pavir.Ha00303 Panicum virgatum Pavir.Ha00303 I
Pavir.J04129 Panicum virgatum Pavir.J04129 I
Pavir.J11500 Panicum virgatum Pavir.J11500 I
Pavir.J36591 Panicum virgatum Pavir.J36591 I
PGSC0003DMG400001376 Solanum tuberosum PGSC0003DMG400001376 I
PGSC0003DMG400001504 Solanum tuberosum PGSC0003DMG400001504 I
PGSC0003DMG400027202 Solanum tuberosum PGSC0003DMG400027202 I
PGSC0003DMG400028282 Solanum tuberosum PGSC0003DMG400028282 N
PGSC0003DMG402004611 Solanum tuberosum PGSC0003DMG402004611 I
PK10274.1 Cannabis sativa PK10274.1 I
Pm009050 Prunus mume Pm009050 I
Pm015392 Prunus mume Pm015392 I
Pm026334 Prunus mume Pm026334 N
POPTR_0004s11720 Populus trichocarpa POPTR_0004s11720 I
POPTR_0008s17350 Populus trichocarpa POPTR_0008s17350 I
POPTR_0009s03240 Populus trichocarpa POPTR_0009s03240 I
POPTR_0010s07450 Populus trichocarpa POPTR_0010s07450 I
POPTR_0017s13370 Populus trichocarpa POPTR_0017s13370 I
PRUPE_ppa016385mg Prunus persica PRUPE_ppa016385mg I
PRUPE_ppa017942mg Prunus persica PRUPE_ppa017942mg I
PRUPE_ppa024234mg Prunus persica PRUPE_ppa024234mg I
PRUPE_ppa024805mg Prunus persica PRUPE_ppa024805mg N
SapurV1A.0008s0940 Salix purpurea SapurV1A.0008s0940 I
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I
SapurV1A.0096s0360 Salix purpurea SapurV1A.0096s0360 I
SapurV1A.0323s0160 Salix purpurea SapurV1A.0323s0160 I
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I
SapurV1A.0589s0170 Salix purpurea SapurV1A.0589s0170 I
Sb05g026820 Sorghum bicolor Sb05g026820 I
Sb08g018370 Sorghum bicolor Sb08g018370 I
Sb08g018580 Sorghum bicolor Sb08g018580 I
Sb09g001590 Sorghum bicolor Sb09g001590 I
Si022826m.g Setaria italica Si022826m.g I
Si022831m.g Setaria italica Si022831m.g I
Si023104m.g Setaria italica Si023104m.g I
Si024470m.g Setaria italica Si024470m.g I
Si026574m.g Setaria italica Si026574m.g I
Solyc02g089190.1 Solanum lycopersicum Solyc02g089190.1 I
Solyc05g053150.1 Solanum lycopersicum Solyc05g053150.1 I
Solyc09g090790.2 Solanum lycopersicum Solyc09g090790.2 I
Solyc10g083900.1 Solanum lycopersicum Solyc10g083900.1 N
Solyc12g099140.1 Solanum lycopersicum Solyc12g099140.1 I
TCM_004878 Theobroma cacao TCM_004878 I
TCM_018971 Theobroma cacao TCM_018971 I
TCM_021037 Theobroma cacao TCM_021037 I
TCM_022293 Theobroma cacao TCM_022293 I
Thhalv10002634m.g Eutrema salsugineum Thhalv10002634m.g I
Thhalv10005370m.g Eutrema salsugineum Thhalv10005370m.g I
Thhalv10010915m.g Eutrema salsugineum Thhalv10010915m.g I
Thhalv10012051m.g Eutrema salsugineum Thhalv10012051m.g I
TRAES3BF065400010CFD_g Triticum aestivum TRAES3BF065400010CFD_g I
Traes_1BS_B44ECE28C Triticum aestivum Traes_1BS_B44ECE28C I
Traes_1DS_47E2D90AC Triticum aestivum Traes_1DS_47E2D90AC I
Traes_1DS_47E2D90AC1 Triticum aestivum Traes_1DS_47E2D90AC1 I
Traes_3AL_A8AF980F3 Triticum aestivum Traes_3AL_A8AF980F3 I
TRIUR3_16862 Triticum urartu TRIUR3_16862 I
TRIUR3_22432 Triticum urartu TRIUR3_22432 I
VIT_05s0049g02260 Vitis vinifera VIT_05s0049g02260 I