YQE_07842 (Dendroctonus ponderosae)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 YQE_07842 T325243_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Mad
M06446_2.00 		Drosophila melanogaster
GYGHCGBCVS
SBGVCGDCRC		 B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648 		1.000 1.000
Mad
M08427_2.00 		Drosophila melanogaster
SNGRCGMSRVSRBNS
SNVYSBYSKCGYCNS		 ChIP-chip
Mathelier et al.(2014)
MA0535.1 		1.000 1.000
Mad
M09692_2.00 		Drosophila melanogaster
KCBGSHGKCGCSNC
GNSGCGMCDSCVGM		 Misc
Kulakovskiy et al.(2009)
Mad 		1.000 1.000
Mad
M11293_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$MAD_Q6 		1.000 1.000
SMAD9
M11274_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_01 		0.917 0.917
Smad9
M11290_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_02 		0.917 0.917
Smad9
M11289_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_03 		0.917 0.917
SMAD5
M05743_2.00 		Homo sapiens
YGTCTAGACW
WGTCTAGACR		 SELEX
Yin et al.(2017)
SMAD5_eDBD_HT-SELEX 		0.861 0.861
SMAD1
M11286_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_01 		0.861 0.861
SMAD1
M11287_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_Q6 		0.861 0.861
Smad5
M11288_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_01 		0.861 0.861
SMAD5
M11271_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_02 		0.861 0.861
Smad5
M11292_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_03 		0.861 0.861
SMAD5
M11272_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_Q5_01 		0.861 0.861
SMAD5
M11273_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_Q5 		0.861 0.861
SMAD5
M05744_2.00 		Homo sapiens
CGTCTAGACR
YGTCTAGACG		 SELEX
Yin et al.(2017)
SMAD5_eDBD_Methyl-HT-SELEX 		0.861 0.861
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENN75595 SMAD 61 96

Links

Other SMAD family TFs
Other Dendroctonus ponderosae TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R011824 Calypte anna Aan_R011824 I
Afo_R002575 Aptenodytes forsteri Afo_R002575 I
Alligator_sinensis_CCG009270.1 Alligator sinensis Alligator_sinensis_CCG009270.1 I
Brh_R009664 Buceros rhinoceros Brh_R009664 I
Cmyd_10006544 Chelonia mydas Cmyd_10006544 I
ENSAMEG00000017735 Ailuropoda melanoleuca ENSAMEG00000017735 I
ENSAPLG00000013409 Anas platyrhynchos ENSAPLG00000013409 I
ENSBTAP00000007904-D1 Bos grunniens ENSBTAP00000007904-D1 I
ENSCSAG00000005442 Chlorocebus sabaeus ENSCSAG00000005442 I
ENSFALG00000007271 Ficedula albicollis ENSFALG00000007271 I
ENSMEUG00000011176 Macropus eugenii ENSMEUG00000011176 I
ENSMGAG00000007084 Meleagris gallopavo ENSMGAG00000007084 I
ENSNLEG00000015079 Nomascus leucogenys ENSNLEG00000015079 I
ENSOANG00000006254 Ornithorhynchus anatinus ENSOANG00000006254 I
ENSOANG00000028755 Ornithorhynchus anatinus ENSOANG00000028755 I
ENSOANG00000030023 Ornithorhynchus anatinus ENSOANG00000030023 I
ENSOARG00000000483 Ovis aries ENSOARG00000000483 I
ENSP00000189444 Macaca fascicularis ENSP00000189444 I
ENSPANG00000021013 Papio anubis ENSPANG00000021013 I
ENSPPYG00000002599 Pongo abelii ENSPPYG00000002599 I
ENSSHAG00000018852 Sarcophilus harrisii ENSSHAG00000018852 I
ENSSTOG00000002191 Ictidomys tridecemlineatus ENSSTOG00000002191 I
Gfo_R002459 Geospiza fortis Gfo_R002459 I
Myotis_brandtii_NFKB2_10025917 Myotis brandtii Myotis_brandtii_NFKB2_10025917 I
Nfkb1 Mus musculus ENSMUSG00000028163 D
NFKB1 Sus scrofa ENSSSCG00000030957 I
Nfkb2 Dipodomys ordii ENSDORG00000013409 I
NFKB2 Sorex araneus ENSSARG00000006180 I
NFKB2 Sus scrofa ENSSSCG00000010580 I
NFKB2 Taeniopygia guttata ENSTGUG00000007491 I
NFKB2 Tursiops truncatus ENSTTRG00000008357 I
NFKB2 Pan troglodytes ENSPTRG00000002888 I
NFKB2 Dasypus novemcinctus ENSDNOG00000032784 I
NFKB2 Cavia porcellus ENSCPOG00000004847 I
NFKB2 Callithrix jacchus ENSCJAG00000017928 I
NFKB2 Canis familiaris ENSCAFG00000010155 I
NFKB2 Bos taurus ENSBTAG00000006017 I
nfkb2 Xenopus tropicalis XB-GENE-970084 I
NFKB2 Felis catus ENSFCAG00000001242 I
NFKB2 Loxodonta africana ENSLAFG00000006805 I
NFKB2 Gallus gallus ENSGALG00000005653 I
NFKB2 Homo sapiens ENSG00000077150 D
NFKB2 Microcebus murinus ENSMICG00000011856 I
NFKB2 Myotis lucifugus ENSMLUG00000006287 I
NFKB2 Macaca mulatta ENSMMUG00000002990 I
Nfkb2 Mus musculus ENSMUSG00000025225 D
Nfkb2 Rattus norvegicus ENSRNOG00000019311 I
NFKB2 Echinops telfairi ENSETEG00000002347 I
NFKB2 Equus caballus ENSECAG00000019593 I
NFKB2 Anolis carolinensis ENSACAG00000014215 I
NFKB2 Oryctolagus cuniculus ENSOCUG00000005735 I
NFKB2 Otolemur garnettii ENSOGAG00000016379 I
NFKB2 Ochotona princeps ENSOPRG00000006569 I
NFKB2 Procavia capensis ENSPCAG00000011503 I
NFKB2 Gorilla gorilla ENSGGOG00000006971 I
Ogr18048 Ophisaurus gracilis Ogr18048 I
Pvit_13855 Pogona vitticeps Pvit_13855 I