CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
NBR_0002112301
(
Nippostrongylus brasiliensis
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03165 (MH1)
IPR003619
NBR_0002112301
T325824_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0002112301-mRNA-1
SMAD
107
206
KQKWAARLLGKLRKDIQPQYRDDFVSSVTGQQPAVCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMGIPLESTDSERLEKCAECVFPAVCVNPYHISIAV
Links
Other
SMAD
family TFs
Other
Nippostrongylus brasiliensis
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28095.m000094
Ricinus communis
28095.m000094
N
0.000
AMTR_s00152p00031760
Amborella trichopoda
AMTR_s00152p00031760
N
0.000
Aquca_075_00033
Aquilegia coerulea
Aquca_075_00033
N
0.000
Bo1g006780
Brassica oleracea
Bo1g006780
N
0.000
Bo3g091670
Brassica oleracea
Bo3g091670
N
0.000
Bo9g024230
Brassica oleracea
Bo9g024230
N
0.000
Bostr.18351s0138
Boechera stricta
Bostr.18351s0138
N
0.000
Bostr.7867s1363
Boechera stricta
Bostr.7867s1363
N
0.000
Bra011580
Brassica rapa
Bra011580
N
0.000
Bra013048
Brassica rapa
Bra013048
N
0.000
BZIP19
Arabidopsis thaliana
AT4G35040
N
0.000
bZIP19
Arabidopsis lyrata
scaffold_700623.1
N
0.000
Cagra.0839s0005
Capsella grandiflora
Cagra.0839s0005
N
0.000
Cagra.2350s0050
Capsella grandiflora
Cagra.2350s0050
N
0.000
Carubv10005538m.g
Capsella rubella
Carubv10005538m.g
N
0.000
Carubv10014436m.g
Capsella rubella
Carubv10014436m.g
N
0.000
cassava766.valid.m1
Manihot esculenta
cassava766.valid.m1
N
0.000
cassava767.valid.m1
Manihot esculenta
cassava767.valid.m1
N
0.000
cassava7721.valid.m1
Manihot esculenta
cassava7721.valid.m1
N
0.000
Ciclev10028931m.g
Citrus clementina
Ciclev10028931m.g
N
0.000
Cla016078
Citrullus lanatus
Cla016078
N
0.000
Cla020585
Citrullus lanatus
Cla020585
N
0.000
Cucsa.234250
Cucumis sativus
Cucsa.234250
N
0.000
Cucsa.370550
Cucumis sativus
Cucsa.370550
N
0.000
Eucgr.I01416
Eucalyptus grandis
Eucgr.I01416
N
0.000
evm.TU.supercontig_37.136
Carica papaya
evm.TU.supercontig_37.136
N
0.000
gene07554-v1.0-hybrid
Fragaria vesca
gene07554-v1.0-hybrid
N
0.000
GLYMA11G11540
Glycine max
GLYMA11G11540
N
0.000
GSMUA_Achr4G10150_001
Musa acuminata
GSMUA_Achr4G10150_001
N
0.000
GSMUA_Achr7G03840_001
Musa acuminata
GSMUA_Achr7G03840_001
N
0.000
Lus10005073.g
Linum usitatissimum
Lus10005073.g
N
0.000
Lus10014121.g
Linum usitatissimum
Lus10014121.g
N
0.000
Lus10027847.g
Linum usitatissimum
Lus10027847.g
N
0.000
MDP0000159670
Malus domestica
MDP0000159670
N
0.000
mgf003848m
Mimulus guttatus
mgf003848m
N
0.000
MTR_4g073100
Medicago truncatula
MTR_4g073100
N
0.000
orange1.1g024365m.g
Citrus sinensis
orange1.1g024365m.g
N
0.000
PDK_20s1365351g001
Phoenix dactylifera
PDK_20s1365351g001
N
0.000
PDK_20s1623091g001
Phoenix dactylifera
PDK_20s1623091g001
N
0.000
PGSC0003DMG400011944
Solanum tuberosum
PGSC0003DMG400011944
N
0.000
PGSC0003DMG401006188
Solanum tuberosum
PGSC0003DMG401006188
N
0.000
Pm020862
Prunus mume
Pm020862
N
0.000
POPTR_0009s13730
Populus trichocarpa
POPTR_0009s13730
N
0.000
PRUPE_ppa009913mg
Prunus persica
PRUPE_ppa009913mg
N
0.000
SapurV1A.0923s0130
Salix purpurea
SapurV1A.0923s0130
N
0.000
Sb03g037300
Sorghum bicolor
Sb03g037300
N
0.000
Solyc01g111580.2
Solanum lycopersicum
Solyc01g111580.2
N
0.000
Thhalv10022810m.g
Eutrema salsugineum
Thhalv10022810m.g
N
0.000
Thhalv10026007m.g
Eutrema salsugineum
Thhalv10026007m.g
N
0.000
VIT_03s0038g02420
Vitis vinifera
VIT_03s0038g02420
N
0.000