GALMADRAFT_215335 (Galerina marginata)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GALMADRAFT_215335 T329965_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
INO
M02485_2.00 		Arabidopsis thaliana
NHNNNYRNNN
NNNYRNNNDN		 PBM
Weirauch et al.(2014)
pTH7516 		0.429 0.293
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KDR69001 Sox 37 94

Links

Other Sox family TFs
Other Galerina marginata TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI003297 Acyrthosiphon pisum ACYPI003297 I 0.428
Bo5g039580 Brassica oleracea Bo5g039580 I 0.429
Bo7g056180 Brassica oleracea Bo7g056180 I 0.429
Bostr.12659s0203 Boechera stricta Bostr.12659s0203 I 0.429
Bra012373 Brassica rapa Bra012373 I 0.429
Bra024599 Brassica rapa Bra024599 I 0.429
CC1G_09089 Coprinopsis cinerea CC1G_09089 N 0.545
chd3 Oryzias latipes ENSORLG00000007107 N 0.474
CHD4 Microcebus murinus ENSMICG00000006588 N 0.430
CHD4 Ochotona princeps ENSOPRG00000003477 N 0.430
CHD4 Echinops telfairi ENSETEG00000005912 N 0.430
CY34DRAFT_417575 Suillus luteus CY34DRAFT_417575 I 0.460
ENSMODG00000024829 Monodelphis domestica ENSMODG00000024829 N 0.430
ENSSHAG00000004107 Sarcophilus harrisii ENSSHAG00000004107 N 0.430
ENSTNIG00000004346 Tetraodon nigroviridis ENSTNIG00000004346 N 0.468
estExt_fgenesh3_kg.C_170031 Heterobasidion annosum estExt_fgenesh3_kg.C_170031 I 0.495
GG13363 Drosophila erecta FBgn0105635 N 0.426
GK17504 Drosophila willistoni FBgn0219503 N 0.426
GLOTRDRAFT_107384 Gloeophyllum trabeum GLOTRDRAFT_107384 I 0.519
GSTUM_00007488001 Tuber melanosporum GSTUM_00007488001 N 0.422
GUITHDRAFT_161762 Guillardia theta GUITHDRAFT_161762 N 0.416
HETIRDRAFT_439796 Heterobasidion irregulare HETIRDRAFT_439796 I 0.495
INO Arabidopsis thaliana AT1G23420 D 0.429
INO Arabidopsis lyrata fgenesh1_pg.C_scaffold_1002152 I 0.429
K443DRAFT_674317 Laccaria amethystina K443DRAFT_674317 N 0.686
LACBIDRAFT_297819 Laccaria bicolor LACBIDRAFT_297819 N 0.686
M407DRAFT_228275 Tulasnella calospora M407DRAFT_228275 N 0.444
M413DRAFT_168289 Hebeloma cylindrosporum M413DRAFT_168289 N 0.680
mgf019496m Mimulus guttatus mgf019496m I 0.415
MGG_00866 Magnaporthe oryzae MGG_00866 N 0.425
PAXINDRAFT_100855 Paxillus involutus PAXINDRAFT_100855 N 0.440
PAXRUDRAFT_625911 Paxillus rubicundulus PAXRUDRAFT_625911 N 0.477
PLEOSDRAFT_1090547 Pleurotus ostreatus PLEOSDRAFT_1090547 I 0.506
PLICRDRAFT_179042 Plicaturopsis crispa PLICRDRAFT_179042 I 0.545
SCLCIDRAFT_1214155 Scleroderma citrinum SCLCIDRAFT_1214155 N 0.487
XP_002941963 Xenopus tropicalis XP_002941963 N 0.430