CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_33465
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_33465
T330110_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA06982
Sox
33
99
SKAPNRFFIYRVAYIKELRKRISNNISMTRISPYISLSWSKEPSEVKEAYKRLSELAENRLKEMRQR
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLOINDRAFT_14813
Rhizophagus irregularis
GLOINDRAFT_14813
N
0.569
GLOINDRAFT_15083
Rhizophagus irregularis
GLOINDRAFT_15083
N
0.577
GLOINDRAFT_16563
Rhizophagus irregularis
GLOINDRAFT_16563
N
0.447
GLOINDRAFT_17166
Rhizophagus irregularis
GLOINDRAFT_17166
N
0.592
GLOINDRAFT_17167
Rhizophagus irregularis
GLOINDRAFT_17167
N
0.654
GLOINDRAFT_209293
Rhizophagus irregularis
GLOINDRAFT_209293
N
0.479
GLOINDRAFT_21291
Rhizophagus irregularis
GLOINDRAFT_21291
N
0.432
GLOINDRAFT_224210
Rhizophagus irregularis
GLOINDRAFT_224210
N
0.553
GLOINDRAFT_22824
Rhizophagus irregularis
GLOINDRAFT_22824
N
0.588
GLOINDRAFT_25683
Rhizophagus irregularis
GLOINDRAFT_25683
N
0.522
GLOINDRAFT_27042
Rhizophagus irregularis
GLOINDRAFT_27042
N
0.438
GLOINDRAFT_30035
Rhizophagus irregularis
GLOINDRAFT_30035
N
0.518
GLOINDRAFT_30036
Rhizophagus irregularis
GLOINDRAFT_30036
N
0.573
GLOINDRAFT_330944
Rhizophagus irregularis
GLOINDRAFT_330944
N
0.423
GLOINDRAFT_33761
Rhizophagus irregularis
GLOINDRAFT_33761
N
0.485
GLOINDRAFT_34079
Rhizophagus irregularis
GLOINDRAFT_34079
N
0.512
GLOINDRAFT_342377
Rhizophagus irregularis
GLOINDRAFT_342377
N
0.491
GLOINDRAFT_344515
Rhizophagus irregularis
GLOINDRAFT_344515
N
0.436
GLOINDRAFT_344841
Rhizophagus irregularis
GLOINDRAFT_344841
N
0.436
GLOINDRAFT_347004
Rhizophagus irregularis
GLOINDRAFT_347004
N
0.467
GLOINDRAFT_347592
Rhizophagus irregularis
GLOINDRAFT_347592
N
0.550
GLOINDRAFT_36163
Rhizophagus irregularis
GLOINDRAFT_36163
N
0.470
GLOINDRAFT_3645
Rhizophagus irregularis
GLOINDRAFT_3645
N
0.432
GLOINDRAFT_9005
Rhizophagus irregularis
GLOINDRAFT_9005
N
0.422
GLOINDRAFT_9129
Rhizophagus irregularis
GLOINDRAFT_9129
N
0.431