CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_347592
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_347592
T330144_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA11935
Sox
35
100
AKSPNAFFIYRIAYLDQLRLHNFRVKMTDMSGYVSASWKKEPSNVKATYKDLARKVERLVIEARQK
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBA_04239
Beauveria bassiana
BBA_04239
N
CCM_02268
Cordyceps militaris
CCM_02268
N
FFUJ_00890
Fusarium fujikuroi
FFUJ_00890
N
FOXG_00678
Fusarium oxysporum
FOXG_00678
N
FPSE_00040
Fusarium pseudograminearum
FPSE_00040
N
MAC_08800
Metarhizium acridum
MAC_08800
N
MAJ_00880
Metarhizium majus
MAJ_00880
N
MANI_001644
Metarhizium anisopliae
MANI_001644
N
MBR_03227
Metarhizium brunneum
MBR_03227
N
MGU_02969
Metarhizium guizhouense
MGU_02969
N
MPH_11049
Macrophomina phaseolina
MPH_11049
N
PODANS_3_9170
Podospora anserina
PODANS_3_9170
N
PODANS_4_8090
Podospora anserina
PODANS_4_8090
N
PV04_05906
Capronia semiimmersa
PV04_05906
N
S40285_00710
Stachybotrys chlorohalonata
S40285_00710
N
SBOR_4994
Sclerotinia borealis
SBOR_4994
N
TRIATDRAFT_321285
Trichoderma atroviride
TRIATDRAFT_321285
N
TRIREDRAFT_57631
Trichoderma reesei
TRIREDRAFT_57631
N
TRIVIDRAFT_1173
Trichoderma virens
TRIVIDRAFT_1173
N
U727_00431020181
Penicillium solitum
U727_00431020181
N
VDAG_07816
Verticillium dahliae
VDAG_07816
N
VDBG_01430
Verticillium albo atrum
VDBG_01430
N
VDBG_01430
Verticillium alfalfae
VDBG_01430
N
Z519_08009
Cladophialophora bantiana
Z519_08009
N