CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_97805
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_97805
T330226_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA09449
Sox
27
91
KSVPNPFIIYRIAVRMECKSKNITIERKNVSNIASNLWKSEPAIVKNTYKEIEIDAKILHNIMIQ
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_05319
Ancylostoma caninum
ANCCAN_05319
N
CGOC_0000090501
Cylicostephanus goldi
CGOC_0000090501
N
HPLM_0000259001
Haemonchus placei
HPLM_0000259001
N
LOAG_10530
Loa loa
LOAG_10530
N
NBR_0000978401
Nippostrongylus brasiliensis
NBR_0000978401
N
NECAME_05891
Necator americanus
NECAME_05891
N
TELCIR_12951
Teladorsagia circumcincta
TELCIR_12951
N
TELCIR_17114
Teladorsagia circumcincta
TELCIR_17114
N
TELCIR_19664
Teladorsagia circumcincta
TELCIR_19664
N
WUBG_12231
Wuchereria bancrofti
WUBG_12231
N