CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PHUM006290
(
Pediculus humanus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
PHUM006290
T331959_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PHUM006290-PA
Sox
10
80
PRGRMTAYAFFVQTCREEHKKKHPDENVVFAEFSKKCAERWKTMLDKEKRRFHEMAEKDKLRYDSEMQNYV
PHUM006290-PA
Sox
100
167
PKRSLSAFFWFCNDERPKVKAINPEYGVGDVAKELGRRWAEADPDTKSKYEAMAEKDKARYDRKKPKS
Links
Other
Sox
family TFs
Other
Pediculus humanus
TFs
250 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA034716
Oryza indica
BGIOSGA034716
N
Ca_08255
Cicer arietinum
Ca_08255
I
chr1.CM0104.260.nc
Lotus japonicus
chr1.CM0104.260.nc
I
Eucgr.A02074
Eucalyptus grandis
Eucgr.A02074
I
Eucgr.K01472
Eucalyptus grandis
Eucgr.K01472
I
F775_26964
Aegilops tauschii
F775_26964
N
GLYMA16G04720
Glycine max
GLYMA16G04720
I
GLYMA19G28515
Glycine max
GLYMA19G28515
I
GRMZM2G018436
Zea mays
GRMZM2G018436
N
GRMZM6G257110
Zea mays
GRMZM6G257110
N
MLOC_5832
Hordeum vulgare
MLOC_5832
N
OBART11G01610
Oryza barthii
OBART11G01610
N
OGLUM11G01340
Oryza glumaepatula
OGLUM11G01340
N
OPUNC11G01340
Oryza punctata
OPUNC11G01340
N
OS11G0127600
Oryza sativa
OS11G0127600
N
Pavir.J21394
Panicum virgatum
Pavir.J21394
I
Pavir.J39049
Panicum virgatum
Pavir.J39049
I
Si010417m.g
Setaria italica
Si010417m.g
N
Traes_5BL_420974D47
Triticum aestivum
Traes_5BL_420974D47
N
TRIUR3_14541
Triticum urartu
TRIUR3_14541
N