TPHA_0P00560 (Tetrapisispora phaffii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 TPHA_0P00560 T332969_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NHP10
M00068_2.00 		Saccharomyces cerevisiae
TCCCCGGC
GCCGGGGA		 PBM
Badis et al.(2008)
NHP10_2069 		0.563 0.662
NHP10
M07496_2.00 		Saccharomyces cerevisiae
YCCCCGGY
RCCGGGGR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0344.1 		0.563 0.662
NHP10
M08604_2.00 		Saccharomyces cerevisiae
TCCCCGGY
RCCGGGGA		 Misc
DeBoer et al.(2011)
YDL002C_502 		0.563 0.662
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCE66214 Sox 94 158

Links

Other Sox family TFs
Other Tetrapisispora phaffii TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
chr1.LjT35C22.100.nc Lotus japonicus chr1.LjT35C22.100.nc N
GLYMA04G08290 Glycine max GLYMA04G08290 N
GLYMA06G08390 Glycine max GLYMA06G08390 N
GLYMA17G24602 Glycine max GLYMA17G24602 N
TCM_036784 Theobroma cacao TCM_036784 N