YQE_03203 (Dendroctonus ponderosae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 YQE_03203 T333332_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENN80368 Sox 620 690
ENN80368 Sox 711 777

Links

Other Sox family TFs
Other Dendroctonus ponderosae TFs

214 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAC59859 Xenopus laevis AAC59859 N 0.429
AAEL011380 Aedes aegypti AAEL011380 N 0.612
AAH44009 Xenopus laevis AAH44009 N 0.422
AAH73449 Xenopus laevis AAH73449 N 0.429
AAI68534 Xenopus tropicalis AAI68534 N 0.463
AALB006743 Anopheles albimanus AALB006743 N 0.612
AARA010318 Anopheles arabiensis AARA010318 N 0.612
AATE010886 Anopheles atroparvus AATE010886 N 0.498
AATE018776 Anopheles atroparvus AATE018776 N 0.612
AC135696.1 Rattus norvegicus ENSRNOG00000058908 N 0.415
ACEP16613 Atta cephalotes ACEP16613 N 0.625
ACOC_0000768601 Angiostrongylus costaricensis ACOC_0000768601 N 0.418
ACUA021022 Anopheles culicifacies ACUA021022 N 0.612
ACYPI007949 Acyrthosiphon pisum ACYPI007949 N 0.620
ADAC001494 Anopheles darlingi ADAC001494 N 0.612
ADIR000367 Anopheles dirus ADIR000367 N 0.508
ADIR011701 Anopheles dirus ADIR011701 N 0.612
AEPI002924 Anopheles epiroticus AEPI002924 N 0.609
AFAF003948 Anopheles farauti AFAF003948 N 0.612
AFUN010134 Anopheles funestus AFUN010134 N 0.612
AGAP000005 Anopheles gambiae AGAP000005 N 0.612
AMAM015540 Anopheles maculatus AMAM015540 N 0.612
AMEC021909 Anopheles melas AMEC021909 N 0.612
AMEM017336 Anopheles merus AMEM017336 N 0.612
AMIN005344 Anopheles minimus AMIN005344 N 0.612
ANCCAN_10156 Ancylostoma caninum ANCCAN_10156 N 0.450
Aqu1.227714 Amphimedon queenslandica Aqu1.227714 N 0.421
AQUA004962 Anopheles quadriannulatus AQUA004962 N 0.578
ASIS000124 Anopheles sinensis ASIS000124 N 0.612
ASIS009950 Anopheles sinensis ASIS009950 N 0.503
ASU_03902 Ascaris suum ASU_03902 N 0.439
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 N 0.429
A_00070 Schistosoma haematobium A_00070 N 0.450
BAA06440 Xenopus laevis BAA06440 N 0.426
BGIBMGA001132 Bombyx mori BGIBMGA001132 N 0.523
BGLB010942 Biomphalaria glabrata BGLB010942 N 0.427
Bm4180 Brugia malayi Bm4180 N 0.439
CapteG158220 Capitella teleta CapteG158220 N 0.540
Cflo_05895--XP_001121384.1_APIME Camponotus floridanus Cflo_05895--XP_001121384.1_APIME N 0.621
CGI_10023724 Crassostrea gigas CGI_10023724 N 0.475
CPIJ014043 Culex quinquefasciatus CPIJ014043 N 0.595
CpipJ_CPIJ014043 Culex pipiens CpipJ_CPIJ014043 N 0.595
csin112095 Clonorchis sinensis csin112095 N 0.495
D915_00818 Fasciola hepatica D915_00818 N 0.503
D917_01254 Trichinella nativa D917_01254 N 0.425
DAPPUDRAFT_232871 Daphnia pulex DAPPUDRAFT_232871 N 0.558
DAPPUDRAFT_306496 Daphnia pulex DAPPUDRAFT_306496 N 0.501
DILT_0001497901 Diphyllobothrium latum DILT_0001497901 N 0.477
DME_0001055201 Dracunculus medinensis DME_0001055201 N 0.422
Dsp1 Drosophila melanogaster FBgn0011764 N 0.594
ECANG7_02036 Echinococcus canadensis ECANG7_02036 N 0.486
EEL_0000068601 Elaeophora elaphi EEL_0000068601 N 0.439
EFV53345 Trichinella spiralis EFV53345 N 0.423
EFV57410 Trichinella spiralis EFV57410 N 0.425
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N 0.453
ENSAMXG00000014031 Astyanax mexicanus ENSAMXG00000014031 N 0.441
ENSAMXG00000014832 Astyanax mexicanus ENSAMXG00000014832 N 0.471
ENSBTAG00000031711 Bos taurus ENSBTAG00000031711 N 0.444
ENSCJAG00000004401 Callithrix jacchus ENSCJAG00000004401 N 0.448
ENSCJAG00000007419 Callithrix jacchus ENSCJAG00000007419 N 0.436
ENSCJAG00000014214 Callithrix jacchus ENSCJAG00000014214 N 0.446
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N 0.446
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N 0.451
ENSCPOG00000003985 Cavia porcellus ENSCPOG00000003985 N 0.415
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N 0.451
ENSCSAG00000015385 Chlorocebus sabaeus ENSCSAG00000015385 N 0.418
ENSCSAVG00000000341 Ciona savignyi ENSCSAVG00000000341 N 0.536
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N 0.446
ENSECAG00000005186 Equus caballus ENSECAG00000005186 N 0.415
ENSFCAG00000028961 Felis catus ENSFCAG00000028961 N 0.445
ENSGMOG00000010060 Gadus morhua ENSGMOG00000010060 N 0.415
ENSMEUG00000011289 Macropus eugenii ENSMEUG00000011289 N 0.416
ENSMICG00000016224 Microcebus murinus ENSMICG00000016224 N 0.447
ENSMMUG00000001275 Macaca mulatta ENSMMUG00000001275 N 0.415
ENSMODG00000009238 Monodelphis domestica ENSMODG00000009238 N 0.415
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N 0.451
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N 0.451
ENSOARG00000011611 Ovis aries ENSOARG00000011611 N 0.435
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N 0.451
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N 0.451
ENSOARG00000017078 Ovis aries ENSOARG00000017078 N 0.415
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N 0.443
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N 0.436
ENSOCUG00000027747 Oryctolagus cuniculus ENSOCUG00000027747 N 0.424
ENSOGAG00000010941 Otolemur garnettii ENSOGAG00000010941 N 0.427
ENSOGAG00000027410 Otolemur garnettii ENSOGAG00000027410 N 0.434
ENSOGAG00000028007 Otolemur garnettii ENSOGAG00000028007 N 0.419
ENSOGAG00000028411 Otolemur garnettii ENSOGAG00000028411 N 0.415
ENSONIG00000019935 Oreochromis niloticus ENSONIG00000019935 N 0.415
ENSPANG00000005029 Papio anubis ENSPANG00000005029 N 0.415
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N 0.451
ENSPANG00000010595 Papio anubis ENSPANG00000010595 N 0.435
ENSPANG00000011105 Papio anubis ENSPANG00000011105 N 0.415
ENSPANG00000023341 Papio anubis ENSPANG00000023341 N 0.428
ENSPFOG00000004794 Poecilia formosa ENSPFOG00000004794 N 0.418
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N 0.479
ENSPMAG00000007397 Petromyzon marinus ENSPMAG00000007397 N 0.418
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N 0.451
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N 0.451
ENSSTOG00000000443 Ictidomys tridecemlineatus ENSSTOG00000000443 N 0.415
ENSSTOG00000012404 Ictidomys tridecemlineatus ENSSTOG00000012404 N 0.417
ENSTBEG00000005874 Tupaia belangeri ENSTBEG00000005874 N 0.420
ENSXMAG00000011106 Xiphophorus maculatus ENSXMAG00000011106 N 0.418
EVEC_0000577301 Enterobius vermicularis EVEC_0000577301 N 0.439
fgenesh2_pm.scaffold_24000033 Branchiostoma floridae fgenesh2_pm.scaffold_24000033 N 0.432
GA11488 Drosophila pseudoobscura FBgn0071539 N 0.594
GB47828 Apis mellifera GB47828 N 0.591
GD17278 Drosophila simulans FBgn0188840 N 0.594
GE17263 Drosophila yakuba FBgn0234741 N 0.594
genemark-nMf.1.1.scaf06964-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf06964-processed-gene-0.3 N 0.429
GF19115 Drosophila ananassae FBgn0096126 N 0.594
GG17955 Drosophila erecta FBgn0110175 N 0.594
GH12282 Drosophila grimshawi FBgn0119761 N 0.594
GI10980 Drosophila mojavensis FBgn0133743 N 0.594
GJ19445 Drosophila virilis FBgn0206588 N 0.598
GK25058 Drosophila willistoni FBgn0227017 N 0.598
Hba_13817 Heterorhabditis bacteriophora Hba_13817 N 0.419
HCOI00860100 Haemonchus contortus HCOI00860100 N 0.418
HDID_0000237901 Hymenolepis diminuta HDID_0000237901 N 0.435
HelroG157878 Helobdella robusta HelroG157878 N 0.462
HelroG87827 Helobdella robusta HelroG87827 N 0.509
HMEL007340 Heliconius melpomene HMEL007340 N 0.590
hmg1/2 Ciona intestinalis ENSCING00000004075 N 0.522
Hmg1l1 Rattus norvegicus ENSRNOG00000034130 N 0.415
HMGB1 Microcebus murinus ENSMICG00000006213 N 0.415
hmgb1a Danio rerio ENSDARG00000099175 N 0.436
hmgb1a Oryzias latipes ENSORLG00000003400 N 0.441
hmgb1a Tetraodon nigroviridis ENSTNIG00000009909 N 0.421
hmgb1a Takifugu rubripes ENSTRUG00000008452 N 0.445
hmgb1b Gasterosteus aculeatus ENSGACG00000011447 N 0.444
HMGB2 Macaca mulatta ENSMMUG00000020008 N 0.437
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N 0.444
HMGB2 Sus scrofa ENSSSCG00000009704 N 0.434
hmgb2.S Xenopus laevis XB-GENE-1000251 N 0.436
hmgb2a Danio rerio ENSDARG00000029722 N 0.492
hmgb2b Gasterosteus aculeatus ENSGACG00000001173 N 0.415
hmgb2b Oryzias latipes ENSORLG00000018687 N 0.415
hmgb2b Tetraodon nigroviridis ENSTNIG00000004824 N 0.415
hmgb2b Takifugu rubripes ENSTRUG00000005015 N 0.415
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N 0.444
HMGB3 Oryctolagus cuniculus ENSOCUG00000024959 N 0.437
hmgb3b Danio rerio ENSDARG00000006408 N 0.438
HmN_000466000 Hymenolepis microstoma HmN_000466000 N 0.435
HNAJ_0001249801 Hymenolepis nana HNAJ_0001249801 N 0.435
Hsal_13110--XP_001121384.1_APIME Harpegnathos saltator Hsal_13110--XP_001121384.1_APIME N 0.621
ISCW017350 Ixodes scapularis ISCW017350 N 0.523
L596_g22130 Steinernema carpocapsae L596_g22130 N 0.440
L889_g13533 Steinernema feltiae L889_g13533 N 0.442
L892_g17551 Steinernema scapterisci L892_g17551 N 0.437
L893_g5947 Steinernema glaseri L893_g5947 N 0.437
LCUP007363 Lucilia cuprina LCUP007363 N 0.592
LDEC006842 Leptinotarsa decemlineata LDEC006842 N 0.686
LOAG_04936 Loa loa LOAG_04936 N 0.439
LOC688583 Rattus norvegicus ENSRNOG00000050910 N 0.451
MCINX009638 Melitaea cinxia MCINX009638 N 0.445
MCOS_0000526101 Mesocestoides corti MCOS_0000526101 N 0.456
MDOA008812 Musca domestica MDOA008812 N 0.578
MhA1_Contig113.frz3.gene9 Meloidogyne hapla MhA1_Contig113.frz3.gene9 N 0.430
Minc03268 Meloidogyne incognita Minc03268 N 0.430
Minc08988 Meloidogyne incognita Minc08988 N 0.430
Myotis_brandtii_Hmgb1_10003213 Myotis brandtii Myotis_brandtii_Hmgb1_10003213 N 0.433
Myotis_brandtii_Hmgb1_10026956 Myotis brandtii Myotis_brandtii_Hmgb1_10026956 N 0.440
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N 0.446
Myotis_brandtii_HMGB3_10026974 Myotis brandtii Myotis_brandtii_HMGB3_10026974 N 0.451
nAv.1.0.1.g02101 Acanthocheilonema viteae nAv.1.0.1.g02101 N 0.439
NBR_0000911001 Nippostrongylus brasiliensis NBR_0000911001 N 0.418
nDi.2.2.2.g04979 Dirofilaria immitis nDi.2.2.2.g04979 N 0.439
NECAME_09126 Necator americanus NECAME_09126 N 0.418
nLs.2.1.2.g00300 Litomosoides sigmodontis nLs.2.1.2.g00300 N 0.439
NV15664 Nasonia vitripennis NV15664 N 0.622
PEQ_0000150901 Parascaris equorum PEQ_0000150901 N 0.439
PHUM006290 Pediculus humanus PHUM006290 N 0.638
Ppa-hmg-1.2 Pristionchus pacificus PPA02361 N 0.453
PXEA_0000566701 Protopolystoma xenopodis PXEA_0000566701 N 0.437
PXEA_0000637001 Protopolystoma xenopodis PXEA_0000637001 N 0.460
PXEA_0002175501 Protopolystoma xenopodis PXEA_0002175501 N 0.481
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N 0.444
RPRC006379 Rhodnius prolixus RPRC006379 N 0.478
RSKR_0000605700 Rhabditophanes kr3021 RSKR_0000605700 N 0.436
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N 0.509
scaffold580-EXSNAP2012.5 Pristionchus exspectatus scaffold580-EXSNAP2012.5 N 0.453
SCUD_0000020101 Schistosoma curassoni SCUD_0000020101 N 0.445
SCUD_0001034301 Schistosoma curassoni SCUD_0001034301 N 0.450
SINV22586 Solenopsis invicta SINV22586 N 0.625
Sjc_0031360 Schistosoma japonicum Sjc_0031360 N 0.482
Sjc_0051340 Schistosoma japonicum Sjc_0051340 N 0.453
SMAR013695 Strigamia maritima SMAR013695 N 0.539
Smp_000980 Schistosoma mansoni Smp_000980 N 0.445
Smp_100090 Schistosoma mansoni Smp_100090 N 0.456
SMRZ_0000842001 Schistosoma margrebowiei SMRZ_0000842001 N 0.450
SMTD_0001017101 Schistosoma mattheei SMTD_0001017101 N 0.450
SMTD_0001194601 Schistosoma mattheei SMTD_0001194601 N 0.445
SMU15002907 Schmidtea mediterranea SMU15002907 N 0.432
SMU15016767 Schmidtea mediterranea SMU15016767 N 0.417
SMU15030256 Schmidtea mediterranea SMU15030256 N 0.434
SMUV_0000232601 Syphacia muris SMUV_0000232601 N 0.439
SPU_005572 Strongylocentrotus purpuratus SPU_005572 N 0.459
SROB_0000153901 Schistosoma rodhaini SROB_0000153901 N 0.445
SROB_0000500401 Schistosoma rodhaini SROB_0000500401 N 0.456
SSLN_0000493501 Schistocephalus solidus SSLN_0000493501 N 0.477
SSLN_0001302101 Schistocephalus solidus SSLN_0001302101 N 0.426
T265_10726 Opisthorchis viverrini T265_10726 N 0.472
T265_12733 Opisthorchis viverrini T265_12733 N 0.451
TCLT_0000879501 Thelazia callipaeda TCLT_0000879501 N 0.439
TCNE_0000567001 Toxocara canis TCNE_0000567001 N 0.439
TELCIR_07111 Teladorsagia circumcincta TELCIR_07111 N 0.418
tetur02g08260 Tetranychus urticae tetur02g08260 N 0.543
tetur02g08340 Tetranychus urticae tetur02g08340 N 0.546
TRE_0000506801 Trichobilharzia regenti TRE_0000506801 N 0.427
TRE_0000690301 Trichobilharzia regenti TRE_0000690301 N 0.491
TsM_000115400 Taenia solium TsM_000115400 N 0.453
TTAC_0000225801 Hydatigera taeniaeformis TTAC_0000225801 N 0.486
WBGene00245261 Onchocerca volvulus WBGene00245261 N 0.439
WUBG_12099 Wuchereria bancrofti WUBG_12099 N 0.476