CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30030113m.g
(
Saccoglossus kowalevskii
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Sakowv30030113m.g
T334350_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23940716_peptide
Sox
197
270
PKRPANAFFMFCQQERPRLQEEYYKERKEEISHLEMTKVLSKKWSDLSGDDKERYYNLYQKDKERYEEEMKHYI
Links
Other
Sox
family TFs
Other
Saccoglossus kowalevskii
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BAUCODRAFT_364513
Baudoinia compniacensis
BAUCODRAFT_364513
N
DOTSEDRAFT_137534
Dothistroma septosporum
DOTSEDRAFT_137534
N
KLLA0_D12232g
Kluyveromyces lactis
KLLA0_D12232g
N
MPH_12253
Macrophomina phaseolina
MPH_12253
N
MYCFIDRAFT_216900
Pseudocercospora fijiensis
MYCFIDRAFT_216900
N
SEPMUDRAFT_151816
Sphaerulina musiva
SEPMUDRAFT_151816
N