Lus10000418.g (Linum usitatissimum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Lus10000418.g T334556_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10000418 Sox 74 134

Links

Other Sox family TFs
Other Linum usitatissimum TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0001290101 Angiostrongylus cantonensis ACAC_0001290101 N
ALUE_0000473701 Ascaris lumbricoides ALUE_0000473701 N
ANCCAN_02799 Ancylostoma caninum ANCCAN_02799 N
ANCCEY_01975 Ancylostoma ceylanicum ANCCEY_01975 N
ANCDUO_01990 Ancylostoma duodenale ANCDUO_01990 N
ASU_14779 Ascaris suum ASU_14779 N
BGIBMGA000497 Bombyx mori BGIBMGA000497 N
Bm4202 Brugia malayi Bm4202 N
BTMF_0001098901 Brugia timori BTMF_0001098901 N
CBG14376 Caenorhabditis briggsae CBG14376 N
CBN25524 Caenorhabditis brenneri CBN25524 N
CJA18896 Caenorhabditis japonica CJA18896 N
CRE00836 Caenorhabditis remanei CRE00836 N
DICVIV_09066 Dictyocaulus viviparus DICVIV_09066 N
EEL_0000836801 Elaeophora elaphi EEL_0000836801 N
Hba_15127 Heterorhabditis bacteriophora Hba_15127 N
hlh-13 Caenorhabditis elegans WBGene00001957 N
HPBE_0000600801 Heligmosomoides bakeri HPBE_0000600801 N
HPLM_0000759901 Haemonchus placei HPLM_0000759901 N
ISCW024442 Ixodes scapularis ISCW024442 N
L596_g22127 Steinernema carpocapsae L596_g22127 N
L889_g13531 Steinernema feltiae L889_g13531 N
L893_g15812 Steinernema glaseri L893_g15812 N
L898_g21023 Steinernema monticolum L898_g21023 N
LOAG_03370 Loa loa LOAG_03370 N
nAv.1.0.1.g07509 Acanthocheilonema viteae nAv.1.0.1.g07509 N
nDi.2.2.2.g05204 Dirofilaria immitis nDi.2.2.2.g05204 N
NECAME_06883 Necator americanus NECAME_06883 N
nOo.2.0.1.g02891 Onchocerca ochengi nOo.2.0.1.g02891 N
PTRK_0000737000 Parastrongyloides trichosuri PTRK_0000737000 N
RSKR_0000764900 Rhabditophanes kr3021 RSKR_0000764900 N
SPAL_0001306600 Strongyloides papillosus SPAL_0001306600 N
SSTP_0000060400 Strongyloides stercoralis SSTP_0000060400 N
SVE_0357400 Strongyloides venezuelensis SVE_0357400 N
SVUK_0000979701 Strongylus vulgaris SVUK_0000979701 N
TCLT_0000871401 Thelazia callipaeda TCLT_0000871401 N
TCNE_0000650001 Toxocara canis TCNE_0000650001 N
TELCIR_07750 Teladorsagia circumcincta TELCIR_07750 N
tetur28g00880 Tetranychus urticae tetur28g00880 N
WBGene00242152 Onchocerca volvulus WBGene00242152 N
WUBG_02321 Wuchereria bancrofti WUBG_02321 N