CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

SMU15001430 *(Schmidtea mediterranea)* Sox
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00505 (HMG_box)	IPR000910	SMU15001430	T334992_2.00	Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Sox5 M00203_2.00	Mus musculus	ATTGTBNN	NNVACAAT	PBM Badis et al.(2009) Sox5_3459	0.512	0.478
Sox13 M00212_2.00	Mus musculus	RAACAATW	WATTGTTY	PBM Badis et al.(2009) Sox13_1718	0.512	0.478
SOX5 M05894_2.00	Homo sapiens	DVACAATRVN	NBYATTGTBH	SMiLE-seq Isakova et al.(2017) SOX5	0.512	0.478
Sox5 M02719_2.00	Mus musculus	NAACAAT	ATTGTTN	SELEX Mathelier et al.(2014) MA0087.1	0.512	0.478
SOX13 M08166_2.00	Homo sapiens	NNACAATGVNN	NNBCATTGTNN	ChIP-seq Mathelier et al.(2014) MA1120.1	0.512	0.478
SOX5 M09390_2.00	Homo sapiens	NAACAATN	NATTGTTN	Misc Kulakovskiy et al.(2013) SOX5_HUMAN.H11MO.0.C	0.512	0.478
Sox5 M09404_2.00	Mus musculus	NAACAATN	NATTGTTN	Misc Kulakovskiy et al.(2013) SOX5_MOUSE.H11MO.0.C	0.512	0.478
SOX5 M11309_2.00	Homo sapiens	NNAACAATNN	NNATTGTTNN	Transfac Matys et al.(2006) V$SOX5_01	0.512	0.478
SOX5 M11310_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX5_Q5	0.512	0.478
Sox6 M00828_2.00	Mus musculus	WTTGTNNNN	NNNNACAAW	PBM Weirauch et al.(2013) pTH3862	0.506	0.449
SOX6 M05892_2.00	Homo sapiens	DRACAATRVN	NBYATTGTYH	SMiLE-seq Isakova et al.(2017) SOX6	0.506	0.449
Sox6 M08169_2.00	Mus musculus	BCWTTGTYYY	RRRACAAWGV	ChIP-seq Mathelier et al.(2014) MA0515.1	0.506	0.449
Sox6 M09640_2.00	Mus musculus	BHWTTGTBNN	NNVACAAWDV	Misc Heinz et al.(2010) Myotubes-Sox6_GSE32627	0.506	0.449
SOX6 M11300_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX6_Q5	0.506	0.449
ROX1 M00070_2.00	Saccharomyces cerevisiae	NRAACAATWNN	NNWATTGTTYN	PBM Badis et al.(2008) ROX1_2099	0.499	0.333
ROX1 M07498_2.00	Saccharomyces cerevisiae	YYHATTGTTYTS	SARAACAATDRR	PBM, CSA and or DIP-chip Mathelier et al.(2014) MA0371.1	0.499	0.333
ROX1 M08607_2.00	Saccharomyces cerevisiae	BYATTGTN	NACAATRV	Misc DeBoer et al.(2011) YPR065W_1396	0.499	0.333
ROX1 M11346_2.00	Saccharomyces cerevisiae	Transfac license required	Transfac license required	Transfac Matys et al.(2006) F$ROX1_Q6_01	0.499	0.333
ROX1 M11347_2.00	Saccharomyces cerevisiae	Transfac license required	Transfac license required	Transfac Matys et al.(2006) F$ROX1_Q6	0.499	0.333
D M03969_2.00	Drosophila melanogaster	AMVGAACAAT	ATTGTTCBKT	SELEX Nitta et al.(2015) D_1	0.484	0.464
D M03970_2.00	Drosophila melanogaster	NAACAATDNCATTGTTN	NAACAATGNHATTGTTN	SELEX Nitta et al.(2015) D_2	0.484	0.464
D M06559_2.00	Drosophila melanogaster	BCYWTTGTTNT	ANAACAAWRGV	B1H Mathelier et al.(2014) MA0445.1	0.484	0.464
D M06448_2.00	Drosophila melanogaster	BCYATTGTYNW	WNRACAATRGV	B1H Zhu et al.(2011) D_NAR_FBgn0000411	0.484	0.464
D M09694_2.00	Drosophila melanogaster	RACAAWRGVH	DBCYWTTGTY	Misc Kulakovskiy et al.(2009) D	0.484	0.464
Sox21a M03978_2.00	Drosophila melanogaster	NMACAMTAVCATTGTKN	NMACAATGBTAKTGTKN	SELEX Nitta et al.(2015) Sox21a_1	0.480	0.464
Sox21a M03979_2.00	Drosophila melanogaster	NNACAMTANCATTGTYH	DRACAATGNTAKTGTNN	SELEX Nitta et al.(2015) Sox21a_2	0.480	0.464
Sox1 M00214_2.00	Mus musculus	NNNNNWBAAW	WTTVWNNNNN	PBM Badis et al.(2009) Sox1_2631	0.474	0.449
SOX2 M03519_2.00	Homo sapiens	DAACAATGKYAKTGTTN	NAACAMTRMCATTGTTH	SELEX Jolma et al.(2013) SOX2_1	0.474	0.449
SOX2 M03520_2.00	Homo sapiens	VTGAATGDYATTCAN	NTGAATRHCATTCAB	SELEX Jolma et al.(2013) SOX2_2	0.474	0.449
SOX2 M03521_2.00	Homo sapiens	NATCAATGNYATTGAWD	HWTCAATRNCATTGATN	SELEX Jolma et al.(2013) SOX2_3	0.474	0.449
SOX2 M03522_2.00	Homo sapiens	NAACAATANCATTGTTH	DAACAATGNTATTGTTN	SELEX Jolma et al.(2013) SOX2_4	0.474	0.449
SOX2 M03523_2.00	Homo sapiens	HATCAATANCATTGATH	DATCAATGNTATTGATD	SELEX Jolma et al.(2013) SOX2_5	0.474	0.449
SOX2 M03524_2.00	Homo sapiens	DTGAATWNCATTCAH	DTGAATGNWATTCAH	SELEX Jolma et al.(2013) SOX2_6	0.474	0.449
Sox1 M03542_2.00	Mus musculus	VACAATWNCATTGTT	AACAATGNWATTGTB	SELEX Jolma et al.(2013) Sox1_1	0.474	0.449
Sox1 M03543_2.00	Mus musculus	NTGAATWNCATTCAN	NTGAATGNWATTCAN	SELEX Jolma et al.(2013) Sox1_2	0.474	0.449
Sox1 M03544_2.00	Mus musculus	TCAATWNCATTGA	TCAATGNWATTGA	SELEX Jolma et al.(2013) Sox1_3	0.474	0.449
Sox1 M03545_2.00	Mus musculus	TGAATDDNHATTCA	TGAATDNHHATTCA	SELEX Jolma et al.(2013) Sox1_4	0.474	0.449
SOX2 M05897_2.00	Homo sapiens	NACAAWRRNN	NNYYWTTGTN	SMiLE-seq Isakova et al.(2017) SOX2	0.474	0.449
Sox2 M08170_2.00	Mus musculus	CCWTTGTB	VACAAWGG	ChIP-seq Mathelier et al.(2014) MA0143.3	0.474	0.449
Sox2 M08041_2.00	Mus musculus	WHWRMADNACAAWRR	YYWTTGTNHTKYWDW	ChIP-seq Chen et al.(2011) SRP000217_Sox2	0.474	0.449
Sox2 M08042_2.00	Mus musculus	TTWRCATNWSAAWRV	BYWTTSWNATGYWAA	ChIP-seq Chen et al.(2011) SRP000712_Sox2	0.474	0.449
SOX2 M09397_2.00	Homo sapiens	BBYYWTTGTBYBB	VVRVACAAWRRVV	Misc Kulakovskiy et al.(2013) SOX2_HUMAN.H11MO.0.A	0.474	0.449
Sox2 M09409_2.00	Mus musculus	THWRCATNACAAWRRV	BYYWTTGTNATGYWDA	Misc Kulakovskiy et al.(2013) SOX2_MOUSE.H11MO.0.A	0.474	0.449
SOX2 M11327_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX2_Q3_01	0.474	0.449
SOX2 M11328_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX2_Q3	0.474	0.449
SOX2 M11329_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX2_Q4	0.474	0.449
SOX2 M11330_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX2_Q6	0.474	0.449
egl-13 M00710_2.00	Caenorhabditis elegans	NNAACAATWN	NWATTGTTNN	PBM Narasimhan et al.(2015) pTH9125	0.467	0.464
Sox102F M03981_2.00	Drosophila melanogaster	ATTGTTCGGTGKN	NMCACCGAACAAT	SELEX Nitta et al.(2015) Sox102F_1	0.467	0.449
Sox102F M03982_2.00	Drosophila melanogaster	NAACAATDDCATTGTTN	NAACAATGHHATTGTTN	SELEX Nitta et al.(2015) Sox102F_2	0.467	0.449
Sox14 M03971_2.00	Drosophila melanogaster	BTGTWCGGTR	YACCGWACAV	SELEX Nitta et al.(2015) Sox14_1	0.465	0.420
Sox14 M03972_2.00	Drosophila melanogaster	VACAATDNCATTGTB	VACAATGNHATTGTB	SELEX Nitta et al.(2015) Sox14_2	0.465	0.420
Sox14 M06449_2.00	Drosophila melanogaster	VYYCTTTGTYC	GRACAAAGRRB	B1H Zhu et al.(2011) Sox14_SANGER_10_FBgn0005612	0.465	0.420
Sox12 M00205_2.00	Mus musculus	HWTTGTBNNN	NNNVACAAWD	PBM Badis et al.(2009) Sox12_3957	0.464	0.406
SOX12 M05789_2.00	Homo sapiens	NATTGTTCGGK	MCCGAACAATN	SELEX Yin et al.(2017) SOX12_eDBD_HT-SELEX	0.464	0.406
SOX12 M05790_2.00	Homo sapiens	YATTGTTCBKT	AMVGAACAATR	SELEX Yin et al.(2017) SOX12_eDBD_Methyl-HT-SELEX	0.464	0.406
Sox21b M03983_2.00	Drosophila melanogaster	NAACAMTWNCAKTGTTB	VAACAMTGNWAKTGTTN	SELEX Nitta et al.(2015) Sox21b_1	0.464	0.478
Sry M00211_2.00	Mus musculus	ATTRTNNNNN	NNNNNAYAAT	PBM Badis et al.(2009) Sry_2833	0.455	0.391
Sry M09408_2.00	Mus musculus	BWTTGTTWH	DWAACAAWV	Misc Kulakovskiy et al.(2013) SRY_MOUSE.H11MO.0.B	0.455	0.391
Sox3 M00827_2.00	Mus musculus	WDTVHNNN	NNNDBAHW	PBM Weirauch et al.(2013) pTH3087	0.453	0.449
Sox21 M00208_2.00	Mus musculus	WTTVWNNNN	NNNNWBAAW	PBM Badis et al.(2009) Sox21_3417	0.453	0.449
SOX21 M03497_2.00	Homo sapiens	AACAATKKYAKTGTT	AACAMTRMMATTGTT	SELEX Jolma et al.(2013) SOX21_1	0.453	0.449
SOX21 M03498_2.00	Homo sapiens	AACAATRKDYAKTGTT	AACAMTRHMYATTGTT	SELEX Jolma et al.(2013) SOX21_2	0.453	0.449
SOX21 M03499_2.00	Homo sapiens	TCAATGDYAKTGA	TCAMTRHCATTGA	SELEX Jolma et al.(2013) SOX21_3	0.453	0.449
SOX21 M03500_2.00	Homo sapiens	TGAATGKYAKTCA	TGAMTRMCATTCA	SELEX Jolma et al.(2013) SOX21_4	0.453	0.449
Sox3 M03538_2.00	Mus musculus	RAACAATRNYATTGTTK	MAACAATRNYATTGTTY	SELEX Jolma et al.(2013) Sox3_1	0.453	0.449
Sox3 M03539_2.00	Mus musculus	BATCAATGBYATTGATD	HATCAATRVCATTGATV	SELEX Jolma et al.(2013) Sox3_2	0.453	0.449
Sox3 M03540_2.00	Mus musculus	DATGAATKNYATTCATR	YATGAATRNMATTCATH	SELEX Jolma et al.(2013) Sox3_3	0.453	0.449
SOX3 M05769_2.00	Homo sapiens	VYATTKTNVS	SBNAMAATRB	SELEX Yin et al.(2017) SOX3_FL_HT-SELEX	0.453	0.449
Sox3 M08168_2.00	Mus musculus	CCTTTGTYYB	VRRACAAAGG	ChIP-seq Mathelier et al.(2014) MA0514.1	0.453	0.449
SOX3 M09391_2.00	Homo sapiens	BYCWTTGTBYB	VRVACAAWGRV	Misc Kulakovskiy et al.(2013) SOX3_HUMAN.H11MO.0.B	0.453	0.449
Sox3 M09405_2.00	Mus musculus	VRVACAAWGGV	BCCWTTGTBYB	Misc Kulakovskiy et al.(2013) SOX3_MOUSE.H11MO.0.C	0.453	0.449
Sox3 M09639_2.00	Mus musculus	VACAAWRG	CYWTTGTB	Misc Heinz et al.(2010) NPC-Sox3_GSE33059	0.453	0.449
SOX3 M05770_2.00	Homo sapiens	BYATTGTBNN	NNVACAATRV	SELEX Yin et al.(2017) SOX3_FL_Methyl-HT-SELEX	0.453	0.449
cic M06452_2.00	Drosophila melanogaster	YYCATTSA	TSAATGRR	B1H Zhu et al.(2011) cic_SANGER_5_FBgn0028386	0.451	0.348
Cic M00195_2.00	Mus musculus	NNTGCTGABN	NVTCAGCANN	PBM Badis et al.(2009) Cic_3454	0.451	0.333
gei-3 M00711_2.00	Caenorhabditis elegans	NWNWMWDN	NHWKWNWN	PBM Narasimhan et al.(2015) pTH10038	0.451	0.333
Sox17 M00199_2.00	Mus musculus	NNNNWSAAT	ATTSWNNNN	PBM Badis et al.(2009) Sox17_2837	0.447	0.391
Sox7 M00209_2.00	Mus musculus	NNNWBAAT	ATTVWNNN	PBM Badis et al.(2009) Sox7_3460	0.447	0.391
SOX7 M03516_2.00	Homo sapiens	AACAATRDNHAKTGTT	AACAMTDNHYATTGTT	SELEX Jolma et al.(2013) SOX7_1	0.447	0.391
SOX7 M03517_2.00	Homo sapiens	DAACAATKDYAKTGTTN	NAACAMTRHMATTGTTH	SELEX Jolma et al.(2013) SOX7_2	0.447	0.391
SOX7 M03518_2.00	Homo sapiens	NATGAATKDCAKTCATN	NATGAMTGHMATTCATN	SELEX Jolma et al.(2013) SOX7_3	0.447	0.391
Sox17 M03533_2.00	Mus musculus	AACAATWDCATTGTT	AACAATGHWATTGTT	SELEX Jolma et al.(2013) Sox17_1	0.447	0.391
Sox17 M03534_2.00	Mus musculus	ATGAATWNCATTCAT	ATGAATGNWATTCAT	SELEX Jolma et al.(2013) Sox17_2	0.447	0.391
SOX7 M05787_2.00	Homo sapiens	ACAATDNHATTGT	ACAATDNHATTGT	SELEX Yin et al.(2017) SOX7_eDBD_HT-SELEX	0.447	0.391
SOX17 M05896_2.00	Homo sapiens	DRACAATRVN	NBYATTGTYH	SMiLE-seq Isakova et al.(2017) SOX17	0.447	0.391
Sox17 M02718_2.00	Mus musculus	SACAATRNN	NNYATTGTS	SELEX Mathelier et al.(2014) MA0078.1	0.447	0.391
Sox17 M08040_2.00	Mus musculus	RVACAAWRRVN	NBYYWTTGTBY	ChIP-seq Chen et al.(2011) GSE19026_Sox17_XENcells	0.447	0.391
SOX17 M09396_2.00	Homo sapiens	BCCATTKTNBN	NVNAMAATGGV	Misc Kulakovskiy et al.(2013) SOX17_HUMAN.H11MO.0.C	0.447	0.391
SOX17 M11323_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX17_01	0.447	0.391
SOX17 M11324_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX17_Q2	0.447	0.391
SOX7 M11325_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX7_Q2	0.447	0.391
SOX7 M05788_2.00	Homo sapiens	ACAATDNHATTGT	ACAATDNHATTGT	SELEX Yin et al.(2017) SOX7_eDBD_Methyl-HT-SELEX	0.447	0.391
Sox14 M00829_2.00	Mus musculus	NAACAATD	HATTGTTN	PBM Weirauch et al.(2013) pTH2677	0.446	0.449
Sox14 M00206_2.00	Mus musculus	NNNABAAW	WTTVTNNN	PBM Badis et al.(2009) Sox14_2677	0.446	0.449
SOX14 M03513_2.00	Homo sapiens	ACAMTAMCATTG	CAATGKTAKTGT	SELEX Jolma et al.(2013) SOX14_1	0.446	0.449
SOX14 M03514_2.00	Homo sapiens	NTGAATANCATTCAN	NTGAATGNTATTCAN	SELEX Jolma et al.(2013) SOX14_2	0.446	0.449
SOX14 M03515_2.00	Homo sapiens	TCAATWVCATTGA	TCAATGBWATTGA	SELEX Jolma et al.(2013) SOX14_3	0.446	0.449
SoxN M03976_2.00	Drosophila melanogaster	VYGHACARTNN	NNAYTGTDCRB	SELEX Nitta et al.(2015) SoxN_1	0.446	0.449
SoxN M03977_2.00	Drosophila melanogaster	NCAATNVCATTGN	NCAATGBNATTGN	SELEX Nitta et al.(2015) SoxN_2	0.446	0.449
SOX14 M05783_2.00	Homo sapiens	NYATTGWNNN	NNNWCAATRN	SELEX Yin et al.(2017) SOX14_eDBD_HT-SELEX	0.446	0.449
SOX14 M05785_2.00	Homo sapiens	NCGAACAATK	MATTGTTCGN	SELEX Yin et al.(2017) SOX14_FL_HT-SELEX	0.446	0.449
SOX14 M05784_2.00	Homo sapiens	NYATTGTNNN	NNNACAATRN	SELEX Yin et al.(2017) SOX14_eDBD_Methyl-HT-SELEX	0.446	0.449
SOX14 M05786_2.00	Homo sapiens	NATTGTTYGB	VCRAACAATN	SELEX Yin et al.(2017) SOX14_FL_Methyl-HT-SELEX	0.446	0.449
sem-2 M02488_2.00	Caenorhabditis elegans	NNNHVNNNNN	NNNNNBDNNN	PBM Weirauch et al.(2014) pTH9043	0.444	0.435
Sox15 M00202_2.00	Mus musculus	WTTVWNNNN	NNNNWBAAW	PBM Badis et al.(2009) Sox15_3457	0.444	0.435
SOX15 M03508_2.00	Homo sapiens	AACAATAMCATTGTT	AACAATGKTATTGTT	SELEX Jolma et al.(2013) SOX15_1	0.444	0.420
SOX15 M03509_2.00	Homo sapiens	ATCAATAMCATTGAT	ATCAATGKTATTGAT	SELEX Jolma et al.(2013) SOX15_2	0.444	0.420
SOX15 M03510_2.00	Homo sapiens	ATGAATAACATTCAT	ATGAATGTTATTCAT	SELEX Jolma et al.(2013) SOX15_3	0.444	0.420
SOX15 M05893_2.00	Homo sapiens	YYWTTGTNHN	NDNACAAWRR	SMiLE-seq Isakova et al.(2017) SOX15	0.444	0.420
SOX15 M11308_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX15_Q3	0.444	0.420
SRY M03525_2.00	Homo sapiens	AACAATANCATTGTT	AACAATGNTATTGTT	SELEX Jolma et al.(2013) SRY_1	0.444	0.377
SRY M03526_2.00	Homo sapiens	AACAATHHNCATTGTT	AACAATGNDDATTGTT	SELEX Jolma et al.(2013) SRY_2	0.444	0.377
SRY M03527_2.00	Homo sapiens	TCAATAMCATTGA	TCAATGKTATTGA	SELEX Jolma et al.(2013) SRY_3	0.444	0.377
SRY M03528_2.00	Homo sapiens	TGAATANCATTCA	TGAATGNTATTCA	SELEX Jolma et al.(2013) SRY_4	0.444	0.377
SRY M05898_2.00	Homo sapiens	NACAATNV	BNATTGTN	SMiLE-seq Isakova et al.(2017) SRY	0.444	0.377
SRY M02717_2.00	Homo sapiens	NDWAACAAW	WTTGTWWHN	SELEX Mathelier et al.(2014) MA0084.1	0.444	0.377
SRY M09398_2.00	Homo sapiens	BWTTGTTWH	DWAACAAWV	Misc Kulakovskiy et al.(2013) SRY_HUMAN.H11MO.0.B	0.444	0.377
SRY M11331_2.00	Homo sapiens	AAWSWMM	KKWSWTT	Transfac Matys et al.(2006) V$SRY_01	0.444	0.377
SRY M11332_2.00	Homo sapiens	HBHWTTGTTWDN	NHWAACAAWDVD	Transfac Matys et al.(2006) V$SRY_02	0.444	0.377
SRY M11333_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SRY_Q6	0.444	0.377
Sox8 M00197_2.00	Mus musculus	NNNWBAAT	ATTVWNNN	PBM Badis et al.(2009) Sox8_1733	0.443	0.391
Sox10 M00826_2.00	Mus musculus	NNNNWBAAT	ATTVWNNNN	PBM Weirauch et al.(2013) pTH1729	0.443	0.391
SOX10 M03491_2.00	Homo sapiens	AACAATTKCAGTGTT	AACACTGMAATTGTT	SELEX Jolma et al.(2013) SOX10_1	0.443	0.391
SOX10 M03492_2.00	Homo sapiens	AACAATRTKCAGTGTT	AACACTGMAYATTGTT	SELEX Jolma et al.(2013) SOX10_2	0.443	0.391
SOX10 M03493_2.00	Homo sapiens	ATCAATTKCAGTGAT	ATCACTGMAATTGAT	SELEX Jolma et al.(2013) SOX10_3	0.443	0.391
SOX10 M03494_2.00	Homo sapiens	ATGAATTKCAGTCAT	ATGACTGMAATTCAT	SELEX Jolma et al.(2013) SOX10_4	0.443	0.391
SOX10 M03495_2.00	Homo sapiens	TGAATGTKCAGTCA	TGACTGMACATTCA	SELEX Jolma et al.(2013) SOX10_5	0.443	0.391
SOX8 M03483_2.00	Homo sapiens	AACAATRTGCAGTGTT	AACACTGCAYATTGTT	SELEX Jolma et al.(2013) SOX8_1	0.443	0.391
SOX8 M03484_2.00	Homo sapiens	ATGAATTKCAGTC	GACTGMAATTCAT	SELEX Jolma et al.(2013) SOX8_2	0.443	0.391
SOX8 M03485_2.00	Homo sapiens	RAACAATTKCAGTGTTN	NAACACTGMAATTGTTY	SELEX Jolma et al.(2013) SOX8_3	0.443	0.391
SOX8 M03486_2.00	Homo sapiens	HATCAATTKCAGTGATN	NATCACTGMAATTGATD	SELEX Jolma et al.(2013) SOX8_4	0.443	0.391
SOX8 M03487_2.00	Homo sapiens	TGAATRTKCAGTCA	TGACTGMAYATTCA	SELEX Jolma et al.(2013) SOX8_5	0.443	0.391
SOX8 M03488_2.00	Homo sapiens	AACAATTDCAGTGTT	AACACTGHAATTGTT	SELEX Jolma et al.(2013) SOX8_6	0.443	0.391
SOX8 M03489_2.00	Homo sapiens	ATGAATTKCAGTC	GACTGMAATTCAT	SELEX Jolma et al.(2013) SOX8_7	0.443	0.391
SOX8 M03490_2.00	Homo sapiens	MATCAATTGCAGTGATK	MATCACTGCAATTGATK	SELEX Jolma et al.(2013) SOX8_8	0.443	0.391
SOX9 M03501_2.00	Homo sapiens	DDACAATRV	BYATTGTHH	SELEX Jolma et al.(2013) SOX9_1	0.443	0.391
SOX9 M03502_2.00	Homo sapiens	AACAATRTGCAGTGTT	AACACTGCAYATTGTT	SELEX Jolma et al.(2013) SOX9_2	0.443	0.391
SOX9 M03503_2.00	Homo sapiens	ATCAATRTKCAGTGAT	ATCACTGMAYATTGAT	SELEX Jolma et al.(2013) SOX9_3	0.443	0.391
SOX9 M03504_2.00	Homo sapiens	ATGAATRTKCAGTCAT	ATGACTGMAYATTCAT	SELEX Jolma et al.(2013) SOX9_4	0.443	0.391
SOX9 M03505_2.00	Homo sapiens	RAACAATTKCAGTGTTH	DAACACTGMAATTGTTY	SELEX Jolma et al.(2013) SOX9_5	0.443	0.391
SOX9 M03506_2.00	Homo sapiens	NATCAATKKYAGTGATN	NATCACTRMMATTGATN	SELEX Jolma et al.(2013) SOX9_6	0.443	0.391
SOX9 M03507_2.00	Homo sapiens	NATGAATTKCAGTCATN	NATGACTGMAATTCATN	SELEX Jolma et al.(2013) SOX9_7	0.443	0.391
Sox10 M03535_2.00	Mus musculus	AACAATTKCAGTGTT	AACACTGMAATTGTT	SELEX Jolma et al.(2013) Sox10_1	0.443	0.391
Sox10 M03536_2.00	Mus musculus	ATCAATTKCAGTGAT	ATCACTGMAATTGAT	SELEX Jolma et al.(2013) Sox10_2	0.443	0.391
Sox10 M03537_2.00	Mus musculus	ATGAATTDCAGTCAT	ATGACTGHAATTCAT	SELEX Jolma et al.(2013) Sox10_3	0.443	0.391
SOX10 M05759_2.00	Homo sapiens	AACAATRNNNYATTGTT	AACAATRNNNYATTGTT	SELEX Yin et al.(2017) SOX10_eDBD_HT-SELEX	0.443	0.391
SOX10 M05761_2.00	Homo sapiens	NACAATRVNNBYATTGTN	NACAATRVNNBYATTGTN	SELEX Yin et al.(2017) SOX10_FL_HT-SELEX	0.443	0.391
SOX8 M05749_2.00	Homo sapiens	NDAACAATRV	BYATTGTTHN	SELEX Yin et al.(2017) SOX8_eDBD_HT-SELEX	0.443	0.391
SOX8 M05751_2.00	Homo sapiens	ACAATRVNNBYATTGT	ACAATRVNNBYATTGT	SELEX Yin et al.(2017) SOX8_FL_HT-SELEX	0.443	0.391
SOX9 M05767_2.00	Homo sapiens	HDAACAATRV	BYATTGTTHD	SELEX Yin et al.(2017) SOX9_eDBD_HT-SELEX	0.443	0.391
SOX10 M05891_2.00	Homo sapiens	BBCWWTGTTH	DAACAWWGVV	SMiLE-seq Isakova et al.(2017) SOX10	0.443	0.391
SOX9 M02716_2.00	Homo sapiens	DAACAATRG	CYATTGTTH	SELEX Mathelier et al.(2014) MA0077.1	0.443	0.391
SOX10 M08165_2.00	Homo sapiens	NNVACAAAGVN	NBCTTTGTBNN	ChIP-seq Mathelier et al.(2014) MA0442.2	0.443	0.391
SOX10 M09387_2.00	Homo sapiens	VAADRVVNBCWTTGTN	NACAAWGVNBBYHTTB	Misc Kulakovskiy et al.(2013) SOX10_HUMAN.H11MO.0.B	0.443	0.391
SOX9 M09389_2.00	Homo sapiens	RMACAAWGVNNBYHTT	AADRVNNBCWTTGTKY	Misc Kulakovskiy et al.(2013) SOX9_HUMAN.H11MO.0.B	0.443	0.391
Sox10 M09403_2.00	Mus musculus	VAADRVVNBCWTTGTN	NACAAWGVNBBYHTTB	Misc Kulakovskiy et al.(2013) SOX10_MOUSE.H11MO.0.B	0.443	0.391
Sox9 M09399_2.00	Mus musculus	RMACAAWGVNNBYHTT	AADRVNNBCWTTGTKY	Misc Kulakovskiy et al.(2013) SOX9_MOUSE.H11MO.0.A	0.443	0.391
SOX10 M11296_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX10_Q3	0.443	0.391
SOX10 M11297_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX10_Q6_01	0.443	0.391
SOX10 M11298_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX10_Q6	0.443	0.391
SOX9 M11304_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX9_09	0.443	0.391
SOX9 M11305_2.00	Homo sapiens	NNNDAACAATRRNN	NNYYATTGTTHNNN	Transfac Matys et al.(2006) V$SOX9_B1	0.443	0.391
SOX9 M11306_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX9_Q4	0.443	0.391
SOX9 M11307_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX9_Q5	0.443	0.391
SOX10 M05760_2.00	Homo sapiens	AACAATRSNSYATTGTT	AACAATRSNSYATTGTT	SELEX Yin et al.(2017) SOX10_eDBD_Methyl-HT-SELEX	0.443	0.391
SOX10 M05762_2.00	Homo sapiens	NACAATRVNNBYATTGTN	NACAATRVNNBYATTGTN	SELEX Yin et al.(2017) SOX10_FL_Methyl-HT-SELEX	0.443	0.391
SOX8 M05750_2.00	Homo sapiens	BYATTGTTNN	NNAACAATRV	SELEX Yin et al.(2017) SOX8_eDBD_Methyl-HT-SELEX	0.443	0.391
SOX8 M05752_2.00	Homo sapiens	ACAATRVNNBYATTGT	ACAATRVNNBYATTGT	SELEX Yin et al.(2017) SOX8_FL_Methyl-HT-SELEX	0.443	0.391
SOX9 M05768_2.00	Homo sapiens	NNNACAATRS	SYATTGTNNN	SELEX Yin et al.(2017) SOX9_eDBD_Methyl-HT-SELEX	0.443	0.391
Sox18 M00204_2.00	Mus musculus	NNNWBAAT	ATTVWNNN	PBM Badis et al.(2009) Sox18_3506	0.440	0.377
SOX18 M03529_2.00	Homo sapiens	AACAATDNCATTGTT	AACAATGNHATTGTT	SELEX Jolma et al.(2013) SOX18_1	0.440	0.377
SOX18 M03530_2.00	Homo sapiens	ATCAATWDCATTGAT	ATCAATGHWATTGAT	SELEX Jolma et al.(2013) SOX18_2	0.440	0.377
SOX18 M03531_2.00	Homo sapiens	ATGAATWYCATTCAT	ATGAATGRWATTCAT	SELEX Jolma et al.(2013) SOX18_3	0.440	0.377
SOX18 M05791_2.00	Homo sapiens	VACRAYGV	BCRTYGTB	SELEX Yin et al.(2017) SOX18_eDBD_HT-SELEX	0.440	0.377
SOX18 M11334_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX18_Q5_01	0.440	0.377
SOX18 M11335_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX18_Q5	0.440	0.377
SOX18 M05792_2.00	Homo sapiens	BYATTGTN	NACAATRV	SELEX Yin et al.(2017) SOX18_eDBD_Methyl-HT-SELEX	0.440	0.377
SOX4 M01026_2.00	Homo sapiens	AACAAWGR	YCWTTGTT	PBM Scharer et al.(2009) Sox4	0.438	0.406
Sox11 M00210_2.00	Mus musculus	WTTGTBNNN	NNNVACAAW	PBM Badis et al.(2009) Sox11_2266	0.438	0.406
Sox4 M00213_2.00	Mus musculus	NNVACAAWD	HWTTGTBNN	PBM Badis et al.(2009) Sox4_2941	0.438	0.406
SOX4 M03496_2.00	Homo sapiens	NAACAATTKCAGTGTT	AACACTGMAATTGTTN	SELEX Jolma et al.(2013) SOX4_1	0.438	0.406
Sox11 M03541_2.00	Mus musculus	AACAATTKCAGTGTT	AACACTGMAATTGTT	SELEX Jolma et al.(2013) Sox11_1	0.438	0.406
SOX4 M05765_2.00	Homo sapiens	NRACAAWGVV	BBCWTTGTYN	SELEX Yin et al.(2017) SOX4_eDBD_HT-SELEX	0.438	0.406
SOX4 M09388_2.00	Homo sapiens	BYCTTTGTYYBB	VVRRACAAAGRV	Misc Kulakovskiy et al.(2013) SOX4_HUMAN.H11MO.0.B	0.438	0.406
Sox4 M09410_2.00	Mus musculus	BYCTTTGTYYBB	VVRRACAAAGRV	Misc Kulakovskiy et al.(2013) SOX4_MOUSE.H11MO.0.A	0.438	0.406
Sox4 M09641_2.00	Mus musculus	BCWTTGTYCN	NGRACAAWGV	Misc Heinz et al.(2010) proB-Sox4_GSE50066	0.438	0.406
SOX11 M11326_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX11_Q6	0.438	0.406
SOX4 M11301_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX4_Q3	0.438	0.406
SOX4 M11302_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX4_Q5_02	0.438	0.406
SOX4 M11303_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX4_Q5	0.438	0.406
SOX4 M05766_2.00	Homo sapiens	NRACAAWGVV	BBCWTTGTYN	SELEX Yin et al.(2017) SOX4_eDBD_Methyl-HT-SELEX	0.438	0.406
For this family, TFs with SR scores > 0.415* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
SMU15001430	Sox	62	130	TPRPLNTFMIFSRHIRRNILSVFPDASNSQLSKELGILWKKVTNEIKSLYEEEAKRLAQLHALEFPDYK

Links
Other Sox family TFs
Other *Schmidtea mediterranea* TFs

2128 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
AAEL007233	Aedes aegypti	AAEL007233	I
ACEP22169	Atta cephalotes	ACEP22169	I
ACUA004653	Anopheles culicifacies	ACUA004653	I
ACYPI004681	Acyrthosiphon pisum	ACYPI004681	I
AFAF005203	Anopheles farauti	AFAF005203	I
Afo_R003517	Aptenodytes forsteri	Afo_R003517	I
AFUN003340	Anopheles funestus	AFUN003340	I
AGAP009286	Anopheles gambiae	AGAP009286	I
ALUE_0000460501	Ascaris lumbricoides	ALUE_0000460501	I
AMEC007368	Anopheles melas	AMEC007368	I
AMEM004474	Anopheles merus	AMEM004474	I
ASIS016906	Anopheles sinensis	ASIS016906	I
ASU_09688	Ascaris suum	ASU_09688	I
A_07830	Schistosoma haematobium	A_07830	I
BGIBMGA004593	Bombyx mori	BGIBMGA004593	I
BGLB000775	Biomphalaria glabrata	BGLB000775	I
Bm6442	Brugia malayi	Bm6442	N
BTMF_0001477001	Brugia timori	BTMF_0001477001	N
CapteG181040	Capitella teleta	CapteG181040	I
Cflo_12390--XP_396560.3_APIME	Camponotus floridanus	Cflo_12390--XP_396560.3_APIME	I
CGI_10014518	Crassostrea gigas	CGI_10014518	I
Cmyd_10013310	Chelonia mydas	Cmyd_10013310	I
CPIJ012530	Culex quinquefasciatus	CPIJ012530	I
CpipJ_CPIJ012530	Culex pipiens	CpipJ_CPIJ012530	I
D917_04367	Trichinella nativa	D917_04367	I
D917_09304	Trichinella nativa	D917_09304	I
DAPPUDRAFT_40822	Daphnia pulex	DAPPUDRAFT_40822	I
DME_0000378901	Dracunculus medinensis	DME_0000378901	N
EEL_0001059101	Elaeophora elaphi	EEL_0001059101	N
EFV49707	Trichinella spiralis	EFV49707	I
EFV60326	Trichinella spiralis	EFV60326	I
ENSAMEG00000004386	Ailuropoda melanoleuca	ENSAMEG00000004386	I
ENSAMEG00000015360	Ailuropoda melanoleuca	ENSAMEG00000015360	I
ENSAPLG00000015055	Anas platyrhynchos	ENSAPLG00000015055	I
ENSBTAP00000027056-D1	Bos grunniens	ENSBTAP00000027056-D1	I
ENSCSAG00000010570	Chlorocebus sabaeus	ENSCSAG00000010570	I
ENSCSAG00000012034	Chlorocebus sabaeus	ENSCSAG00000012034	I
ENSFALG00000009923	Ficedula albicollis	ENSFALG00000009923	I
ENSFALG00000013223	Ficedula albicollis	ENSFALG00000013223	I
ENSGMOG00000008799	Gadus morhua	ENSGMOG00000008799	I
ENSGMOG00000010906	Gadus morhua	ENSGMOG00000010906	I
ENSLACG00000002734	Latimeria chalumnae	ENSLACG00000002734	I
ENSLACG00000013316	Latimeria chalumnae	ENSLACG00000013316	I
ENSLOCG00000010412	Lepisosteus oculatus	ENSLOCG00000010412	I
ENSLOCG00000015885	Lepisosteus oculatus	ENSLOCG00000015885	I
ENSMEUG00000011663	Macropus eugenii	ENSMEUG00000011663	I
ENSMPUG00000006851	Mustela putorius furo	ENSMPUG00000006851	I
ENSMPUG00000016916	Mustela putorius furo	ENSMPUG00000016916	I
ENSNLEG00000011662	Nomascus leucogenys	ENSNLEG00000011662	I
ENSOARG00000011770	Ovis aries	ENSOARG00000011770	I
ENSONIG00000003101	Oreochromis niloticus	ENSONIG00000003101	I
ENSONIG00000012688	Oreochromis niloticus	ENSONIG00000012688	I
ENSP00000411145	Macaca fascicularis	ENSP00000411145	I
ENSP00000411145-D1	Bos grunniens	ENSP00000411145-D1	I
ENSP00000418804	Macaca fascicularis	ENSP00000418804	I
ENSPANG00000013797	Papio anubis	ENSPANG00000013797	I
ENSPANG00000015063	Papio anubis	ENSPANG00000015063	I
ENSPFOG00000017410	Poecilia formosa	ENSPFOG00000017410	I
ENSPPYG00000013750	Pongo abelii	ENSPPYG00000013750	I
ENSPSIG00000009843	Pelodiscus sinensis	ENSPSIG00000009843	I
ENSSSCG00000016612	Sus scrofa	ENSSSCG00000016612	I
ENSSTOG00000022201	Ictidomys tridecemlineatus	ENSSTOG00000022201	I
ENSSTOG00000023296	Ictidomys tridecemlineatus	ENSSTOG00000023296	I
ENSXMAG00000002453	Xiphophorus maculatus	ENSXMAG00000002453	I
erm	Drosophila melanogaster	FBgn0031375	D
e_gw.37.272.1	Branchiostoma floridae	e_gw.37.272.1	I
FEZF1	Anolis carolinensis	ENSACAG00000006695	I
FEZF1	Bos taurus	ENSBTAG00000005103	I
FEZF1	Callithrix jacchus	ENSCJAG00000017326	I
FEZF1	Cavia porcellus	ENSCPOG00000013096	I
fezf1	Danio rerio	ENSDARG00000010270	I
FEZF1	Dasypus novemcinctus	ENSDNOG00000002699	I
FEZF1	Equus caballus	ENSECAG00000022989	I
FEZF1	Homo sapiens	ENSG00000128610	D
fezf1	Gasterosteus aculeatus	ENSGACG00000008652	I
FEZF1	Gallus gallus	ENSGALG00000008941	I
FEZF1	Loxodonta africana	ENSLAFG00000013550	I
FEZF1	Monodelphis domestica	ENSMODG00000015458	I
Fezf1	Mus musculus	ENSMUSG00000029697	I
FEZF1	Oryctolagus cuniculus	ENSOCUG00000021285	I
FEZF1	Otolemur garnettii	ENSOGAG00000002663	I
fezf1	Oryzias latipes	ENSORLG00000019987	I
Fezf1	Rattus norvegicus	ENSRNOG00000007608	I
FEZF1	Taeniopygia guttata	ENSTGUG00000004488	I
fezf1	Tetraodon nigroviridis	ENSTNIG00000010414	I
fezf1	Takifugu rubripes	ENSTRUG00000016410	I
fezf1	Xenopus tropicalis	XB-GENE-985988	I
fezf1.S	Xenopus laevis	XB-GENE-985994	I
FEZF2	Bos taurus	ENSBTAG00000020302	I
FEZF2	Canis familiaris	ENSCAFG00000007121	I
FEZF2	Callithrix jacchus	ENSCJAG00000019670	I
FEZF2	Cavia porcellus	ENSCPOG00000001697	I
fezf2	Danio rerio	ENSDARG00000070677	I
FEZF2	Dasypus novemcinctus	ENSDNOG00000033694	I
FEZF2	Equus caballus	ENSECAG00000021037	I
FEZF2	Felis catus	ENSFCAG00000012726	I
FEZF2	Homo sapiens	ENSG00000153266	I
fezf2	Gasterosteus aculeatus	ENSGACG00000011629	I
FEZF2	Gallus gallus	ENSGALG00000007184	I
FEZF2	Gorilla gorilla	ENSGGOG00000026200	I
FEZF2	Loxodonta africana	ENSLAFG00000022425	I
FEZF2	Myotis lucifugus	ENSMLUG00000007639	I
FEZF2	Macaca mulatta	ENSMMUG00000021592	I
FEZF2	Monodelphis domestica	ENSMODG00000002738	I
Fezf2	Mus musculus	ENSMUSG00000021743	I
FEZF2	Oryctolagus cuniculus	ENSOCUG00000002823	I
FEZF2	Otolemur garnettii	ENSOGAG00000008112	I
fezf2	Oryzias latipes	ENSORLG00000010156	I
FEZF2	Procavia capensis	ENSPCAG00000006260	I
FEZF2	Pan troglodytes	ENSPTRG00000015071	I
FEZF2	Pteropus vampyrus	ENSPVAG00000003007	I
Fezf2	Rattus norvegicus	ENSRNOG00000009206	I
FEZF2	Sorex araneus	ENSSARG00000009934	I
FEZF2	Sus scrofa	ENSSSCG00000011487	I
fezf2	Takifugu rubripes	ENSTRUG00000000387	I
FEZF2	Tursiops truncatus	ENSTTRG00000002587	I
fezf2	Xenopus tropicalis	XB-GENE-1006432	I
fezf2.L	Xenopus laevis	XB-GENE-1006438	I
GA16381	Drosophila pseudoobscura	FBgn0076396	I
GB40147	Apis mellifera	GB40147	I
GD22883	Drosophila simulans	FBgn0194277	I
GE15291	Drosophila yakuba	FBgn0232877	I
GF19706	Drosophila ananassae	FBgn0096713	I
GG24566	Drosophila erecta	FBgn0116698	I
GH10862	Drosophila grimshawi	FBgn0118343	I
GH25019	Drosophila grimshawi	FBgn0132474	I
GI13715	Drosophila mojavensis	FBgn0136470	I
GJ19651	Drosophila virilis	FBgn0206793	I
GK24816	Drosophila willistoni	FBgn0226775	I
GL18461	Drosophila persimilis	FBgn0156062	I
GM16579	Drosophila sechellia	FBgn0171492	I
HelroG145609	Helobdella robusta	HelroG145609	I
HelroG63207	Helobdella robusta	HelroG63207	I
HMEL004320	Heliconius melpomene	HMEL004320	I
ISCW016275	Ixodes scapularis	ISCW016275	I
L798_10183	Zootermopsis nevadensis	L798_10183	I
LCUP016153	Lucilia cuprina	LCUP016153	I
LDEC014963	Leptinotarsa decemlineata	LDEC014963	I
LOAG_04822	Loa loa	LOAG_04822	I
LotgiG68213	Lottia gigantea	LotgiG68213	I
MCINX000801	Melitaea cinxia	MCINX000801	I
MDOA009701	Musca domestica	MDOA009701	I
Myotis_brandtii_FEZF2_10014238	Myotis brandtii	Myotis_brandtii_FEZF2_10014238	I
nAv.1.0.1.g00595	Acanthocheilonema viteae	nAv.1.0.1.g00595	I
nOo.2.0.1.g00928	Onchocerca ochengi	nOo.2.0.1.g00928	N
nRc.2.0.1.g12535	Romanomermis culicivorax	nRc.2.0.1.g12535	I
NV15785	Nasonia vitripennis	NV15785	I
Ocbimv22019950m.g	Octopus bimaculoides	Ocbimv22019950m.g	I
PHUM527180	Pediculus humanus	PHUM527180	I
PPAI010881	Phlebotomus papatasi	PPAI010881	I
Sakowv30000725m.g	Saccoglossus kowalevskii	Sakowv30000725m.g	I
SINV23141	Solenopsis invicta	SINV23141	I
SMAR013549	Strigamia maritima	SMAR013549	I
Smp_144540	Schistosoma mansoni	Smp_144540	I
SMU15029105	Schmidtea mediterranea	SMU15029105	I
SPER_0003711101	Spirometra erinaceieuropaei	SPER_0003711101	I
SPU_019089	Strongylocentrotus purpuratus	SPU_019089	I
SPU_027491	Strongylocentrotus purpuratus	SPU_027491	I
TC004673	Tribolium castaneum	TC004673	I
TCLT_0000483901	Thelazia callipaeda	TCLT_0000483901	N
tetur01g01260	Tetranychus urticae	tetur01g01260	I
TMUE_s0065001300	Trichuris muris	TMUE_s0065001300	I
TRE_0000291701	Trichobilharzia regenti	TRE_0000291701	I
TsM_000224400	Taenia solium	TsM_000224400	N
TTRE_0000144401	Trichuris trichiura	TTRE_0000144401	I
WBGene00240874	Onchocerca volvulus	WBGene00240874	I
YQE_09264	Dendroctonus ponderosae	YQE_09264	I

SMU15001430 (Schmidtea mediterranea) Sox

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

2128 Related TFs

SMU15001430 **(Schmidtea mediterranea)
Sox**