CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMU15013231
(
Schmidtea mediterranea
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SMU15013231
T335010_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMU15013231
Sox
10
80
PSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYE
SMU15013231
Sox
102
168
PKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSKYEEMNKEAKEKYNLAMLEYK
Links
Other
Sox
family TFs
Other
Schmidtea mediterranea
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AARA009355
Anopheles arabiensis
AARA009355
N
0.000
ACOM031370
Anopheles coluzzii
ACOM031370
N
0.000
AEPI009274
Anopheles epiroticus
AEPI009274
N
0.000
Alligator_sinensis_CCG013371.1
Alligator sinensis
Alligator_sinensis_CCG013371.1
N
0.000
AMEC017016
Anopheles melas
AMEC017016
N
0.000
AMEM000352
Anopheles merus
AMEM000352
N
0.000
AQUA001972
Anopheles quadriannulatus
AQUA001972
N
0.000
Brh_R008554
Buceros rhinoceros
Brh_R008554
N
0.000
Cflo_00615--XP_001121679.1_APIME
Camponotus floridanus
Cflo_00615--XP_001121679.1_APIME
N
0.000
CLEC000374
Cimex lectularius
CLEC000374
N
0.000
CLEC013286
Cimex lectularius
CLEC013286
N
0.000
CPIJ012901
Culex quinquefasciatus
CPIJ012901
N
0.000
CpipJ_CPIJ012901
Culex pipiens
CpipJ_CPIJ012901
N
0.000
ENSFALG00000014565
Ficedula albicollis
ENSFALG00000014565
N
0.000
ENSOARG00000006771
Ovis aries
ENSOARG00000006771
N
0.000
ENSOPRG00000000197
Ochotona princeps
ENSOPRG00000000197
N
0.000
ENSPSIG00000008887
Pelodiscus sinensis
ENSPSIG00000008887
N
0.000
ENSPSIG00000013477
Pelodiscus sinensis
ENSPSIG00000013477
N
0.000
estExt_fgenesh2_pg.C_20012
Branchiostoma floridae
estExt_fgenesh2_pg.C_20012
N
0.000
GA25126
Drosophila pseudoobscura
FBgn0246509
N
0.000
GA28679
Drosophila pseudoobscura
FBgn0250039
N
0.000
HHAL000942-PA
Halyomorpha halys
HHAL000942-PA
N
0.000
HHAL008173-PA
Halyomorpha halys
HHAL008173-PA
N
0.000
KLF10
Tupaia belangeri
ENSTBEG00000007597
N
0.000
KLF15
Taeniopygia guttata
ENSTGUG00000008214
N
0.000
KLF15
Felis catus
ENSFCAG00000015732
N
0.000
KLF15
Sorex araneus
ENSSARG00000012869
N
0.000
KLF15
Monodelphis domestica
ENSMODG00000022616
N
0.000
KLF9
Canis familiaris
ENSCAFG00000001867
N
0.000
L798_04124
Zootermopsis nevadensis
L798_04124
N
0.000
LDEC010928
Leptinotarsa decemlineata
LDEC010928
N
0.000
LDEC024398
Leptinotarsa decemlineata
LDEC024398
N
0.000
LLOJ001749
Lutzomyia longipalpis
LLOJ001749
N
0.000
MESCA001789
Megaselia scalaris
MESCA001789
N
0.000
Ocbimv22007603m.g
Octopus bimaculoides
Ocbimv22007603m.g
N
0.000
PPAI010678
Phlebotomus papatasi
PPAI010678
N
0.000
SMAR000017
Strigamia maritima
SMAR000017
N
0.000
TC003611
Tribolium castaneum
TC003611
N
0.000