CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMU15016767
(
Schmidtea mediterranea
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SMU15016767
T335014_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMU15016767
Sox
10
80
PKGAMSAYACFVQVIREKYKNKHPDEAVVFSEFSKKCAEKWRQLGPKEKKQFEDMAAVDKARYIKEMNEYV
SMU15016767
Sox
99
165
PKRGLSAFFLYSQEFRGQIKDEHPDWRVGDIAKELGKRWETCADKGKYEELARREKERFEREMDEYK
Links
Other
Sox
family TFs
Other
Schmidtea mediterranea
TFs
195 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB009657
Anopheles albimanus
AALB009657
I
0.000
AARA006703
Anopheles arabiensis
AARA006703
I
0.000
AATE004130
Anopheles atroparvus
AATE004130
I
0.000
ACYPI48102
Acyrthosiphon pisum
ACYPI48102
I
0.000
AEPI004731
Anopheles epiroticus
AEPI004731
I
0.000
AFUN005541
Anopheles funestus
AFUN005541
I
0.000
AGAP002234
Anopheles gambiae
AGAP002234
I
0.000
AMAM005986
Anopheles maculatus
AMAM005986
I
0.000
AMEC011506
Anopheles melas
AMEC011506
I
0.000
AMEM012481
Anopheles merus
AMEM012481
I
0.000
AMIN000835
Anopheles minimus
AMIN000835
I
0.000
AQUA004261
Anopheles quadriannulatus
AQUA004261
I
0.000
ASTEI03427
Anopheles stephensi
ASTEI03427
I
0.000
CapteG177303
Capitella teleta
CapteG177303
I
0.000
CBG09846
Caenorhabditis briggsae
CBG09846
I
0.000
CPIJ015933
Culex quinquefasciatus
CPIJ015933
I
0.000
CpipJ_CPIJ015933
Culex pipiens
CpipJ_CPIJ015933
I
0.000
CRE25188
Caenorhabditis remanei
CRE25188
I
0.000
GA10225
Drosophila pseudoobscura
FBgn0070284
I
0.000
GD19868
Drosophila simulans
FBgn0191357
I
0.000
GE10213
Drosophila yakuba
FBgn0228087
I
0.000
GF16659
Drosophila ananassae
FBgn0093680
I
0.000
GG13368
Drosophila erecta
FBgn0105640
I
0.000
GH18089
Drosophila grimshawi
FBgn0125557
I
0.000
GI24589
Drosophila mojavensis
FBgn0147311
I
0.000
GJ22654
Drosophila virilis
FBgn0209758
I
0.000
GK13826
Drosophila willistoni
FBgn0215834
I
0.000
GL22067
Drosophila persimilis
FBgn0159659
I
0.000
GM10889
Drosophila sechellia
FBgn0165835
I
0.000
HelroG148423
Helobdella robusta
HelroG148423
I
0.000
HPLM_0002159101
Haemonchus placei
HPLM_0002159101
I
0.000
HR83
Aedes aegypti
AAEL007350
I
0.000
Hr83
Drosophila melanogaster
FBgn0037436
D
0.000
Hsal_03084--XP_001121181.1_APIME
Harpegnathos saltator
Hsal_03084--XP_001121181.1_APIME
I
0.000
ISCW008659
Ixodes scapularis
ISCW008659
I
0.000
L798_08383
Zootermopsis nevadensis
L798_08383
I
0.000
LLOJ000718
Lutzomyia longipalpis
LLOJ000718
I
0.000
LLOJ001302
Lutzomyia longipalpis
LLOJ001302
I
0.000
LotgiG132791
Lottia gigantea
LotgiG132791
I
0.000
MDOA009347
Musca domestica
MDOA009347
I
0.000
NV10871
Nasonia vitripennis
NV10871
I
0.000
Ocbimv22005486m.g
Octopus bimaculoides
Ocbimv22005486m.g
I
0.000
PPAI010314
Phlebotomus papatasi
PPAI010314
I
0.000
Sakowv30002570m.g
Saccoglossus kowalevskii
Sakowv30002570m.g
I
0.000
SMAR006023
Strigamia maritima
SMAR006023
I
0.000
SPU_012586
Strongylocentrotus purpuratus
SPU_012586
I
0.000
TC010460
Tribolium castaneum
TC010460
I
0.000
tetur01g07700
Tetranychus urticae
tetur01g07700
I
0.000