fgeneshTM_pg.4_#_200 (Tremella mesenterica)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 fgeneshTM_pg.4_#_200 T335238_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ROX1
M00070_2.00 		Saccharomyces cerevisiae
NRAACAATWNN
NNWATTGTTYN		 PBM
Badis et al.(2008)
ROX1_2099 		0.484 0.391
ROX1
M07498_2.00 		Saccharomyces cerevisiae
YYHATTGTTYTS
SARAACAATDRR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1 		0.484 0.391
ROX1
M08607_2.00 		Saccharomyces cerevisiae
BYATTGTN
NACAATRV		 Misc
DeBoer et al.(2011)
YPR065W_1396 		0.484 0.391
ROX1
M11346_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6_01 		0.484 0.391
ROX1
M11347_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6 		0.484 0.391
fmf-1
M02491_2.00 		Neurospora crassa
TCTTTGTY
RACAAAGA		 PBM
Weirauch et al.(2014)
pTH8941 		0.419 0.377
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgeneshTM_pg.4_#_200 Sox 336 405

Links

Other Sox family TFs
Other Tremella mesenterica TFs

363 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_176060 Agaricus bisporus AGABI2DRAFT_176060 I 0.500
AGABI2DRAFT_179892 Agaricus bisporus AGABI2DRAFT_179892 N 0.428
AGABI2DRAFT_56847 Agaricus bisporus AGABI2DRAFT_56847 N
BN946_scf184844.g19 Trametes cinnabarina BN946_scf184844.g19 N 0.417
BN946_scf184940.g27 Trametes cinnabarina BN946_scf184940.g27 I
BN946_scf184994.g55 Trametes cinnabarina BN946_scf184994.g55 I
CC1G_06427 Coprinopsis cinerea CC1G_06427 N
CC1G_06994 Coprinopsis cinerea CC1G_06994 I
CC1G_07617 Coprinopsis cinerea CC1G_07617 I
CERSUDRAFT_118953 Ceriporiopsis subvermispora CERSUDRAFT_118953 N 0.462
CERSUDRAFT_61596 Ceriporiopsis subvermispora CERSUDRAFT_61596 N 0.434
CY34DRAFT_28710 Suillus luteus CY34DRAFT_28710 I 0.442
CY34DRAFT_797588 Suillus luteus CY34DRAFT_797588 I
CY34DRAFT_811615 Suillus luteus CY34DRAFT_811615 N 0.474
DACRYDRAFT_31804 Dacryopinax sp DACRYDRAFT_31804 I
DICSQDRAFT_18314 Dichomitus squalens DICSQDRAFT_18314 N 0.468
E5Q_00699 Mixia osmundae E5Q_00699 I 0.521
fgenesh1_pg.C_scaffold_2000484 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_2000484 N 0.513
fgenesh1_pg.C_scaffold_7000401 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_7000401 I 0.468
fgenesh1_pg.C_scaffold_7000440 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_7000440 N 0.435
FIBRA_04764 Fibroporia radiculosa FIBRA_04764 I
FIBRA_08093 Fibroporia radiculosa FIBRA_08093 N 0.434
FOMPIDRAFT_1124101 Fomitopsis pinicola FOMPIDRAFT_1124101 N 0.449
FOMPIDRAFT_59166 Fomitopsis pinicola FOMPIDRAFT_59166 I 0.469
GALMADRAFT_1187634 Galerina marginata GALMADRAFT_1187634 N
GALMADRAFT_133211 Galerina marginata GALMADRAFT_133211 I 0.437
GALMADRAFT_137502 Galerina marginata GALMADRAFT_137502 N 0.451
GALMADRAFT_243779 Galerina marginata GALMADRAFT_243779 N 0.451
GALMADRAFT_252018 Galerina marginata GALMADRAFT_252018 N 0.451
GALMADRAFT_775072 Galerina marginata GALMADRAFT_775072 I
GLOINDRAFT_52776 Rhizophagus irregularis GLOINDRAFT_52776 I 0.416
GLOTRDRAFT_98119 Gloeophyllum trabeum GLOTRDRAFT_98119 I 0.445
GYMLUDRAFT_162520 Gymnopus luxurians GYMLUDRAFT_162520 I 0.458
GYMLUDRAFT_248699 Gymnopus luxurians GYMLUDRAFT_248699 N 0.430
GYMLUDRAFT_43821 Gymnopus luxurians GYMLUDRAFT_43821 N 0.462
GYMLUDRAFT_71519 Gymnopus luxurians GYMLUDRAFT_71519 I 0.419
HYDPIDRAFT_99715 Hydnomerulius pinastri HYDPIDRAFT_99715 N 0.474
JAAARDRAFT_117714 Jaapia argillacea JAAARDRAFT_117714 I
JAAARDRAFT_209377 Jaapia argillacea JAAARDRAFT_209377 I 0.484
JAAARDRAFT_209433 Jaapia argillacea JAAARDRAFT_209433 I 0.438
K437DRAFT_265905 Tilletiaria anomala K437DRAFT_265905 I 0.491
K443DRAFT_250430 Laccaria amethystina K443DRAFT_250430 I
K443DRAFT_7978 Laccaria amethystina K443DRAFT_7978 I
LACBIDRAFT_294333 Laccaria bicolor LACBIDRAFT_294333 N
LACBIDRAFT_311738 Laccaria bicolor LACBIDRAFT_311738 I
M378DRAFT_12668 Amanita muscaria M378DRAFT_12668 N
M378DRAFT_85158 Amanita muscaria M378DRAFT_85158 N 0.462
M404DRAFT_69579 Pisolithus tinctorius M404DRAFT_69579 I
M408DRAFT_328232 Serendipita vermifera M408DRAFT_328232 N
M408DRAFT_330902 Serendipita vermifera M408DRAFT_330902 N
M413DRAFT_24002 Hebeloma cylindrosporum M413DRAFT_24002 I 0.425
M413DRAFT_445326 Hebeloma cylindrosporum M413DRAFT_445326 I 0.487
M422DRAFT_195883 Sphaerobolus stellatus M422DRAFT_195883 N 0.475
Moror_17490 Moniliophthora roreri Moror_17490 I 0.465
Moror_2098 Moniliophthora roreri Moror_2098 I 0.497
Moror_5744 Moniliophthora roreri Moror_5744 N 0.469
Moror_6135 Moniliophthora roreri Moror_6135 I 0.443
MVLG_00343 Microbotryum violaceum MVLG_00343 N
PAXINDRAFT_137714 Paxillus involutus PAXINDRAFT_137714 I 0.473
PAXRUDRAFT_827004 Paxillus rubicundulus PAXRUDRAFT_827004 N 0.462
PAXRUDRAFT_95391 Paxillus rubicundulus PAXRUDRAFT_95391 I
PFL1_03871 Pseudozyma flocculosa PFL1_03871 I 0.529
PHACADRAFT_252287 Phanerochaete carnosa PHACADRAFT_252287 I 0.442
PHACADRAFT_30138 Phanerochaete carnosa PHACADRAFT_30138 I 0.442
PHACADRAFT_54114 Phanerochaete carnosa PHACADRAFT_54114 N 0.462
PHLGIDRAFT_121875 Phlebiopsis gigantea PHLGIDRAFT_121875 N 0.447
PHLGIDRAFT_46949 Phlebiopsis gigantea PHLGIDRAFT_46949 I 0.464
PIIN_00209 Piriformospora indica PIIN_00209 N
PIIN_01973 Piriformospora indica PIIN_01973 I 0.504
PIIN_02385 Piriformospora indica PIIN_02385 N
PILCRDRAFT_533337 Piloderma croceum PILCRDRAFT_533337 I
PILCRDRAFT_818013 Piloderma croceum PILCRDRAFT_818013 I 0.481
PISMIDRAFT_104531 Pisolithus microcarpus PISMIDRAFT_104531 I 0.462
PISMIDRAFT_39129 Pisolithus microcarpus PISMIDRAFT_39129 I
PLEOSDRAFT_173235 Pleurotus ostreatus PLEOSDRAFT_173235 I 0.487
POSPLDRAFT_42762 Postia placenta POSPLDRAFT_42762 I
PTRG_10423 Pyrenophora triticirepentis PTRG_10423 I
SCHCODRAFT_111770 Schizophyllum commune SCHCODRAFT_111770 I 0.436
SCHCODRAFT_113446 Schizophyllum commune SCHCODRAFT_113446 I 0.436
SCHCODRAFT_114945 Schizophyllum commune SCHCODRAFT_114945 I 0.436
SCHCODRAFT_114988 Schizophyllum commune SCHCODRAFT_114988 I 0.466
SCHCODRAFT_232060 Schizophyllum commune SCHCODRAFT_232060 N
SCHCODRAFT_238903 Schizophyllum commune SCHCODRAFT_238903 I
SCHCODRAFT_255090 Schizophyllum commune SCHCODRAFT_255090 N 0.434
SCHCODRAFT_255799 Schizophyllum commune SCHCODRAFT_255799 N 0.435
SCLCIDRAFT_6962 Scleroderma citrinum SCLCIDRAFT_6962 I
SERLA73DRAFT_141654 Serpula lacrymans SERLA73DRAFT_141654 I 0.433
SERLA73DRAFT_71121 Serpula lacrymans SERLA73DRAFT_71121 I
SERLA73DRAFT_84266 Serpula lacrymans SERLA73DRAFT_84266 I 0.473