CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HDID_0000408601
(
Hymenolepis diminuta
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
HDID_0000408601
T336418_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HDID_0000408601-mRNA-1
Sox
9
79
PKSPLSGFACFVQVIRDKHRTLHPDKNIIFSEFSKKCAELWRVMPPNKRAPFEEMSKIDTKRYNREMGEYV
HDID_0000408601-mRNA-1
Sox
129
195
PKRALSAFFFFCDQQRPQIRSAHPEWRVSEIAKELGRLWDECTDKAPFERQAQSDKLRYEEEMRQYK
Links
Other
Sox
family TFs
Other
Hymenolepis diminuta
TFs
84 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL004174
Aedes aegypti
AAEL004174
I
0.000
AAEL013504
Aedes aegypti
AAEL013504
I
0.000
AALB004781
Anopheles albimanus
AALB004781
I
0.000
AARA007626
Anopheles arabiensis
AARA007626
I
0.000
AATE019626
Anopheles atroparvus
AATE019626
I
0.000
ACHR005948
Anopheles christyi
ACHR005948
I
0.000
ACOM024997
Anopheles coluzzii
ACOM024997
I
0.000
ACUA013605
Anopheles culicifacies
ACUA013605
I
0.000
ADAC005019
Anopheles darlingi
ADAC005019
I
0.000
ADIR008855
Anopheles dirus
ADIR008855
I
0.000
AEPI008783
Anopheles epiroticus
AEPI008783
I
0.000
AFAF003219
Anopheles farauti
AFAF003219
I
0.000
AFUN010103
Anopheles funestus
AFUN010103
I
0.000
AGAP005895
Anopheles gambiae
AGAP005895
I
0.000
AGAP005896
Anopheles gambiae
AGAP005896
I
0.000
AMEC016175
Anopheles melas
AMEC016175
I
0.000
AMEM015129
Anopheles merus
AMEM015129
I
0.000
AMIN011562
Anopheles minimus
AMIN011562
I
0.000
AQUA010990
Anopheles quadriannulatus
AQUA010990
I
0.000
ASIS012852
Anopheles sinensis
ASIS012852
I
0.000
ASTEI02809
Anopheles stephensi
ASTEI02809
I
0.000
CPIJ004922
Culex quinquefasciatus
CPIJ004922
I
0.000
CpipJ_CPIJ004922
Culex pipiens
CpipJ_CPIJ004922
I
0.000
Doc1
Drosophila melanogaster
FBgn0028789
I
0.000
Doc2
Drosophila melanogaster
FBgn0035956
D
0.000
Doc3
Drosophila melanogaster
FBgn0035954
D
0.000
ENSGMOG00000002896
Gadus morhua
ENSGMOG00000002896
I
0.000
ENSONIG00000010454
Oreochromis niloticus
ENSONIG00000010454
I
0.000
ENSPFOG00000016384
Poecilia formosa
ENSPFOG00000016384
I
0.000
ENSXMAG00000005715
Xiphophorus maculatus
ENSXMAG00000005715
I
0.000
GA18655
Drosophila pseudoobscura
FBgn0078655
I
0.000
GA18682
Drosophila pseudoobscura
FBgn0078682
I
0.000
GA18721
Drosophila pseudoobscura
FBgn0078721
I
0.000
GD14148
Drosophila simulans
FBgn0185836
I
0.000
GE20799
Drosophila yakuba
FBgn0238093
I
0.000
GE20800
Drosophila yakuba
FBgn0238094
I
0.000
GE21264
Drosophila yakuba
FBgn0238533
I
0.000
GF10130
Drosophila ananassae
FBgn0087171
I
0.000
GF24374
Drosophila ananassae
FBgn0101368
I
0.000
GF24375
Drosophila ananassae
FBgn0101369
I
0.000
GG14368
Drosophila erecta
FBgn0106627
I
0.000
GG14369
Drosophila erecta
FBgn0106628
I
0.000
GG15041
Drosophila erecta
FBgn0107295
I
0.000
GH14955
Drosophila grimshawi
FBgn0122430
I
0.000
GH16540
Drosophila grimshawi
FBgn0124011
I
0.000
GH16541
Drosophila grimshawi
FBgn0124012
I
0.000
GI11482
Drosophila mojavensis
FBgn0134242
I
0.000
GI13829
Drosophila mojavensis
FBgn0136583
I
0.000
GI13831
Drosophila mojavensis
FBgn0136585
I
0.000
GJ11695
Drosophila virilis
FBgn0198949
I
0.000
GJ11697
Drosophila virilis
FBgn0198951
I
0.000
GK12279
Drosophila willistoni
FBgn0214289
I
0.000
GK12352
Drosophila willistoni
FBgn0214362
I
0.000
GK12353
Drosophila willistoni
FBgn0214363
I
0.000
GL15033
Drosophila persimilis
FBgn0152637
I
0.000
GL15034
Drosophila persimilis
FBgn0152638
I
0.000
GL15081
Drosophila persimilis
FBgn0152685
I
0.000
GM24895
Drosophila sechellia
FBgn0179757
I
0.000
GM25112
Drosophila sechellia
FBgn0179973
I
0.000
GM25113
Drosophila sechellia
FBgn0179974
I
0.000
LCUP005945
Lucilia cuprina
LCUP005945
I
0.000
LCUP005946
Lucilia cuprina
LCUP005946
I
0.000
LCUP005947
Lucilia cuprina
LCUP005947
I
0.000
MDOA003812
Musca domestica
MDOA003812
I
0.000
MDOA006037
Musca domestica
MDOA006037
I
0.000
MDOA015287
Musca domestica
MDOA015287
I
0.000
MESCA005219
Megaselia scalaris
MESCA005219
I
0.000
TBX2
Takifugu rubripes
ENSTRUG00000008297
D
0.000
TBX2
Oryzias latipes
ENSORLG00000014792
I
0.000
TBX2
Gasterosteus aculeatus
ENSGACG00000013575
D
0.000