CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L892_g15959
(
Steinernema scapterisci
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
L892_g15959
T336531_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L892_g15959.t1
Sox
597
663
PKKNQTAYFLWFSDNRSSITKEGDRVADTAKRAGAIWKDMSSEDKAPYEERAKEDKDRYQREMKKYL
L892_g15959.t2
Sox
600
666
PKKNQTAYFLWFSDNRSSITKEGDRVADTAKRAGAIWKDMSSEDKAPYEERAKEDKDRYQREMKKYL
Links
Other
Sox
family TFs
Other
Steinernema scapterisci
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR07G10060
Leersia perrieri
LPERR07G10060
N
0.000
LPERR07G10290
Leersia perrieri
LPERR07G10290
N
0.000
OB10G16010
Oryza brachyantha
OB10G16010
N
0.000
OBART07G12220
Oryza barthii
OBART07G12220
N
0.000
OBART07G12230
Oryza barthii
OBART07G12230
N
0.000
OGLUM07G11710
Oryza glumaepatula
OGLUM07G11710
N
0.000
OGLUM07G11720
Oryza glumaepatula
OGLUM07G11720
N
0.000
ONIVA07G11150
Oryza nivara
ONIVA07G11150
N
0.000
OPUNC07G10920
Oryza punctata
OPUNC07G10920
N
0.000
ORGLA10G0057400
Oryza glaberrima
ORGLA10G0057400
N
0.000
ORUFI07G12350
Oryza rufipogon
ORUFI07G12350
N
0.000
OS07G0434300
Oryza sativa
OS07G0434300
N
0.000