CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SCUD_0000020101
(
Schistosoma curassoni
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SCUD_0000020101
T336915_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SCUD_0000020101-mRNA-1
Sox
10
80
PKGPMSAYACFVQVIREEHKKKHPGEQIVFSDFSKKCAERWKLMTPKEKKRFEDLAVLDRERFNREMCDYV
SCUD_0000020101-mRNA-1
Sox
100
166
PARAWSAFFFFCDEFRSKVRESNPDWKVADIAKELGRQWETCQDKAKYELLAQKDKQRYEEDMIKYR
Links
Other
Sox
family TFs
Other
Schistosoma curassoni
TFs
240 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AABR07025074.1
Rattus norvegicus
ENSRNOG00000032550
N
0.426
AAEL011380
Aedes aegypti
AAEL011380
N
0.511
AAH44009
Xenopus laevis
AAH44009
N
0.425
AAI68534
Xenopus tropicalis
AAI68534
N
0.447
AALB006743
Anopheles albimanus
AALB006743
N
0.511
AARA010318
Anopheles arabiensis
AARA010318
N
0.511
AATE010886
Anopheles atroparvus
AATE010886
N
0.453
AATE018776
Anopheles atroparvus
AATE018776
N
0.511
AC135696.1
Rattus norvegicus
ENSRNOG00000058908
N
0.424
ACEP16613
Atta cephalotes
ACEP16613
N
0.475
ACOC_0000768601
Angiostrongylus costaricensis
ACOC_0000768601
N
0.452
ACUA021022
Anopheles culicifacies
ACUA021022
N
0.511
ACYPI007949
Acyrthosiphon pisum
ACYPI007949
N
0.468
ADAC001494
Anopheles darlingi
ADAC001494
N
0.511
ADIR000367
Anopheles dirus
ADIR000367
N
0.427
ADIR011701
Anopheles dirus
ADIR011701
N
0.511
AEPI002924
Anopheles epiroticus
AEPI002924
N
0.511
AFAF003948
Anopheles farauti
AFAF003948
N
0.511
AFUN010134
Anopheles funestus
AFUN010134
N
0.511
AGAP000005
Anopheles gambiae
AGAP000005
N
0.511
AMAM015540
Anopheles maculatus
AMAM015540
N
0.511
AMEC021909
Anopheles melas
AMEC021909
N
0.511
AMEM017336
Anopheles merus
AMEM017336
N
0.511
AMIN005344
Anopheles minimus
AMIN005344
N
0.511
ANCCAN_10156
Ancylostoma caninum
ANCCAN_10156
N
0.432
Aqu1.227714
Amphimedon queenslandica
Aqu1.227714
N
0.434
AQUA004962
Anopheles quadriannulatus
AQUA004962
N
0.483
ASIS000124
Anopheles sinensis
ASIS000124
N
0.511
ASIS009950
Anopheles sinensis
ASIS009950
N
0.447
ASU_03902
Ascaris suum
ASU_03902
N
0.433
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2
N
0.483
A_00070
Schistosoma haematobium
A_00070
N
0.463
A_05510
Schistosoma haematobium
A_05510
N
0.505
BAA06440
Xenopus laevis
BAA06440
N
0.458
BGIBMGA001132
Bombyx mori
BGIBMGA001132
N
0.479
BGLB010942
Biomphalaria glabrata
BGLB010942
N
0.505
Bm4180
Brugia malayi
Bm4180
N
0.433
BXY_1555400
Bursaphelenchus xylophilus
BXY_1555400
N
0.449
CapteG158220
Capitella teleta
CapteG158220
N
0.470
CBG17468
Caenorhabditis briggsae
CBG17468
N
0.428
CBN17977
Caenorhabditis brenneri
CBN17977
N
0.423
Cflo_05895--XP_001121384.1_APIME
Camponotus floridanus
Cflo_05895--XP_001121384.1_APIME
N
0.475
CGI_10023724
Crassostrea gigas
CGI_10023724
N
0.452
CJA09678
Caenorhabditis japonica
CJA09678
N
0.428
CPIJ014043
Culex quinquefasciatus
CPIJ014043
N
0.523
CpipJ_CPIJ014043
Culex pipiens
CpipJ_CPIJ014043
N
0.523
csin110255
Clonorchis sinensis
csin110255
N
0.544
csin112095
Clonorchis sinensis
csin112095
N
0.430
D915_00818
Fasciola hepatica
D915_00818
N
0.623
D915_15256
Fasciola hepatica
D915_15256
N
0.548
D917_01254
Trichinella nativa
D917_01254
N
0.435
D917_08189
Trichinella nativa
D917_08189
N
0.442
D918_07195
Trichuris suis
D918_07195
N
0.452
DAPPUDRAFT_232871
Daphnia pulex
DAPPUDRAFT_232871
N
0.480
DAPPUDRAFT_306496
Daphnia pulex
DAPPUDRAFT_306496
N
0.440
DILT_0000548601
Diphyllobothrium latum
DILT_0000548601
N
0.448
DILT_0001497901
Diphyllobothrium latum
DILT_0001497901
N
0.609
DME_0001055201
Dracunculus medinensis
DME_0001055201
N
0.451
Dsp1
Drosophila melanogaster
FBgn0011764
N
0.494
ECANG7_02036
Echinococcus canadensis
ECANG7_02036
N
0.595
ECANG7_05481
Echinococcus canadensis
ECANG7_05481
N
0.432
EEL_0000068601
Elaeophora elaphi
EEL_0000068601
N
0.433
EFV53345
Trichinella spiralis
EFV53345
N
0.421
EFV57410
Trichinella spiralis
EFV57410
N
0.435
EmuJ_000768300
Echinococcus multilocularis
EmuJ_000768300
N
0.432
EmuJ_001049000
Echinococcus multilocularis
EmuJ_001049000
N
0.633
ENSAMXG00000014031
Astyanax mexicanus
ENSAMXG00000014031
N
0.442
ENSAMXG00000014832
Astyanax mexicanus
ENSAMXG00000014832
N
0.463
ENSBTAG00000031711
Bos taurus
ENSBTAG00000031711
N
0.430
ENSCJAG00000008378
Callithrix jacchus
ENSCJAG00000008378
N
0.424
ENSCJAG00000008384
Callithrix jacchus
ENSCJAG00000008384
N
0.421
ENSCJAG00000014214
Callithrix jacchus
ENSCJAG00000014214
N
0.435
ENSCJAG00000022832
Callithrix jacchus
ENSCJAG00000022832
N
0.435
ENSCJAG00000033322
Callithrix jacchus
ENSCJAG00000033322
N
0.430
ENSCPOG00000003985
Cavia porcellus
ENSCPOG00000003985
N
0.424
ENSCSAG00000013078
Chlorocebus sabaeus
ENSCSAG00000013078
N
0.430
ENSCSAVG00000000341
Ciona savignyi
ENSCSAVG00000000341
N
0.486
ENSDNOG00000005537
Dasypus novemcinctus
ENSDNOG00000005537
N
0.435
ENSECAG00000005186
Equus caballus
ENSECAG00000005186
N
0.424
ENSFCAG00000028961
Felis catus
ENSFCAG00000028961
N
0.441
ENSGMOG00000010060
Gadus morhua
ENSGMOG00000010060
N
0.455
ENSGMOG00000010657
Gadus morhua
ENSGMOG00000010657
N
0.429
ENSMMUG00000001275
Macaca mulatta
ENSMMUG00000001275
N
0.424
ENSMODG00000009238
Monodelphis domestica
ENSMODG00000009238
N
0.424
ENSMPUG00000018359
Mustela putorius furo
ENSMPUG00000018359
N
0.430
ENSOARG00000010383
Ovis aries
ENSOARG00000010383
N
0.463
ENSOARG00000011611
Ovis aries
ENSOARG00000011611
N
0.444
ENSOARG00000015382
Ovis aries
ENSOARG00000015382
N
0.463
ENSOARG00000015955
Ovis aries
ENSOARG00000015955
N
0.463
ENSOARG00000017078
Ovis aries
ENSOARG00000017078
N
0.424
ENSOCUG00000004133
Oryctolagus cuniculus
ENSOCUG00000004133
N
0.449
ENSOCUG00000021132
Oryctolagus cuniculus
ENSOCUG00000021132
N
0.463
ENSOCUG00000023449
Oryctolagus cuniculus
ENSOCUG00000023449
N
0.416
ENSOCUG00000027747
Oryctolagus cuniculus
ENSOCUG00000027747
N
0.444
ENSOGAG00000028411
Otolemur garnettii
ENSOGAG00000028411
N
0.424
ENSOGAG00000032152
Otolemur garnettii
ENSOGAG00000032152
N
0.421
ENSONIG00000005505
Oreochromis niloticus
ENSONIG00000005505
N
0.426
ENSONIG00000019935
Oreochromis niloticus
ENSONIG00000019935
N
0.451
ENSPANG00000005029
Papio anubis
ENSPANG00000005029
N
0.424
ENSPANG00000007527
Papio anubis
ENSPANG00000007527
N
0.463
ENSPANG00000011105
Papio anubis
ENSPANG00000011105
N
0.424
ENSPFOG00000004533
Poecilia formosa
ENSPFOG00000004533
N
0.432
ENSPFOG00000004794
Poecilia formosa
ENSPFOG00000004794
N
0.454
ENSPFOG00000008464
Poecilia formosa
ENSPFOG00000008464
N
0.461
ENSPMAG00000007397
Petromyzon marinus
ENSPMAG00000007397
N
0.479
ENSPPYG00000011668
Pongo abelii
ENSPPYG00000011668
N
0.419
ENSSSCG00000020770
Sus scrofa
ENSSSCG00000020770
N
0.430
ENSSSCG00000024283
Sus scrofa
ENSSSCG00000024283
N
0.430
ENSSTOG00000000443
Ictidomys tridecemlineatus
ENSSTOG00000000443
N
0.424
ENSTBEG00000009427
Tupaia belangeri
ENSTBEG00000009427
N
0.415
ENSXMAG00000006844
Xiphophorus maculatus
ENSXMAG00000006844
N
0.432
ENSXMAG00000011106
Xiphophorus maculatus
ENSXMAG00000011106
N
0.454
EVEC_0000577301
Enterobius vermicularis
EVEC_0000577301
N
0.433
fgenesh2_pm.scaffold_24000033
Branchiostoma floridae
fgenesh2_pm.scaffold_24000033
N
0.500
GA11488
Drosophila pseudoobscura
FBgn0071539
N
0.494
GD17278
Drosophila simulans
FBgn0188840
N
0.494
GE17263
Drosophila yakuba
FBgn0234741
N
0.494
genemark-nMf.1.1.scaf06964-processed-gene-0.3
Meloidogyne floridensis
genemark-nMf.1.1.scaf06964-processed-gene-0.3
N
0.483
GF19115
Drosophila ananassae
FBgn0096126
N
0.494
GG17955
Drosophila erecta
FBgn0110175
N
0.494
GH12282
Drosophila grimshawi
FBgn0119761
N
0.494
GI10980
Drosophila mojavensis
FBgn0133743
N
0.494
GJ19445
Drosophila virilis
FBgn0206588
N
0.494
GK25058
Drosophila willistoni
FBgn0227017
N
0.494
Hba_13817
Heterorhabditis bacteriophora
Hba_13817
N
0.451
HCOI00860100
Haemonchus contortus
HCOI00860100
N
0.452
HDID_0000237901
Hymenolepis diminuta
HDID_0000237901
N
0.590
HDID_0000408601
Hymenolepis diminuta
HDID_0000408601
N
0.475
HelroG157726
Helobdella robusta
HelroG157726
N
0.439
HelroG157878
Helobdella robusta
HelroG157878
N
0.527
HelroG87827
Helobdella robusta
HelroG87827
N
0.504
HMEL007340
Heliconius melpomene
HMEL007340
N
0.477
hmg-1.2
Caenorhabditis elegans
WBGene00001972
N
0.423
hmg1/2
Ciona intestinalis
ENSCING00000004075
N
0.510
Hmg1l1
Rattus norvegicus
ENSRNOG00000034130
N
0.424
Hmg1l1
Rattus norvegicus
ENSRNOG00000051482
N
0.424
HMGB1
Microcebus murinus
ENSMICG00000006213
N
0.424
hmgb1a
Danio rerio
ENSDARG00000099175
N
0.457
hmgb1a
Oryzias latipes
ENSORLG00000003400
N
0.469
hmgb1a
Tetraodon nigroviridis
ENSTNIG00000009909
N
0.438
hmgb1a
Takifugu rubripes
ENSTRUG00000008452
N
0.480
hmgb1b
Gasterosteus aculeatus
ENSGACG00000011447
N
0.432
hmgb1b
Takifugu rubripes
ENSTRUG00000004822
N
0.457
HMGB2
Macaca mulatta
ENSMMUG00000020008
N
0.450
Hmgb2
Rattus norvegicus
ENSRNOG00000033321
N
0.470
HMGB2
Sus scrofa
ENSSSCG00000009704
N
0.461
hmgb2.S
Xenopus laevis
XB-GENE-1000251
N
0.447
hmgb2a
Danio rerio
ENSDARG00000029722
N
0.467
hmgb2b
Gasterosteus aculeatus
ENSGACG00000001173
N
0.434
hmgb2b
Oryzias latipes
ENSORLG00000018687
N
0.465
hmgb2b
Tetraodon nigroviridis
ENSTNIG00000004824
N
0.451
hmgb2b
Takifugu rubripes
ENSTRUG00000005015
N
0.451
Hmgb2l1
Rattus norvegicus
ENSRNOG00000013167
N
0.470
HMGB3
Oryctolagus cuniculus
ENSOCUG00000024959
N
0.426
hmgb3b
Danio rerio
ENSDARG00000006408
N
0.432
HmN_000466000
Hymenolepis microstoma
HmN_000466000
N
0.590
HmN_000813000
Hymenolepis microstoma
HmN_000813000
N
0.471
HNAJ_0000974401
Hymenolepis nana
HNAJ_0000974401
N
0.475
HNAJ_0001249801
Hymenolepis nana
HNAJ_0001249801
N
0.590
Hsal_13110--XP_001121384.1_APIME
Harpegnathos saltator
Hsal_13110--XP_001121384.1_APIME
N
0.475
ISCW017350
Ixodes scapularis
ISCW017350
N
0.505
L596_g22130
Steinernema carpocapsae
L596_g22130
N
0.433
L889_g13533
Steinernema feltiae
L889_g13533
N
0.436
L892_g17551
Steinernema scapterisci
L892_g17551
N
0.433
L893_g5947
Steinernema glaseri
L893_g5947
N
0.436
LCUP007363
Lucilia cuprina
LCUP007363
N
0.494
LDEC006842
Leptinotarsa decemlineata
LDEC006842
N
0.460
LOAG_04936
Loa loa
LOAG_04936
N
0.433
LOC688583
Rattus norvegicus
ENSRNOG00000050910
N
0.430
LotgiG200052
Lottia gigantea
LotgiG200052
N
0.446
MCOS_0000526101
Mesocestoides corti
MCOS_0000526101
N
0.637
MCOS_0000726501
Mesocestoides corti
MCOS_0000726501
N
0.478
MDOA008812
Musca domestica
MDOA008812
N
0.509
Myotis_brandtii_Hmgb2_10018437
Myotis brandtii
Myotis_brandtii_Hmgb2_10018437
N
0.468
nAv.1.0.1.g02101
Acanthocheilonema viteae
nAv.1.0.1.g02101
N
0.433
NBR_0000911001
Nippostrongylus brasiliensis
NBR_0000911001
N
0.452
nDi.2.2.2.g04979
Dirofilaria immitis
nDi.2.2.2.g04979
N
0.433
NECAME_09126
Necator americanus
NECAME_09126
N
0.452
nRc.2.0.1.g43473
Romanomermis culicivorax
nRc.2.0.1.g43473
N
0.445
NV15664
Nasonia vitripennis
NV15664
N
0.475
PEQ_0000150901
Parascaris equorum
PEQ_0000150901
N
0.433
PHUM006290
Pediculus humanus
PHUM006290
N
0.465
Ppa-hmg-1.2
Pristionchus pacificus
PPA02361
N
0.445
PTRK_0000986200
Parastrongyloides trichosuri
PTRK_0000986200
N
0.483
PXEA_0000566701
Protopolystoma xenopodis
PXEA_0000566701
N
0.531
PXEA_0000637001
Protopolystoma xenopodis
PXEA_0000637001
N
0.464
PXEA_0002175501
Protopolystoma xenopodis
PXEA_0002175501
N
0.619
RGD1561694
Rattus norvegicus
ENSRNOG00000029107
N
0.470
RSKR_0000605700
Rhabditophanes kr3021
RSKR_0000605700
N
0.449
Sakowv30042012m.g
Saccoglossus kowalevskii
Sakowv30042012m.g
N
0.465
SBAD_0000405201
Soboliphyme baturini
SBAD_0000405201
N
0.445
scaffold580-EXSNAP2012.5
Pristionchus exspectatus
scaffold580-EXSNAP2012.5
N
0.445
SCUD_0000067701
Schistosoma curassoni
SCUD_0000067701
N
0.505
SCUD_0001034301
Schistosoma curassoni
SCUD_0001034301
N
0.463
SINV22586
Solenopsis invicta
SINV22586
N
0.475
Sjc_0031360
Schistosoma japonicum
Sjc_0031360
N
0.687
Sjc_0051340
Schistosoma japonicum
Sjc_0051340
N
0.466
SMAR013695
Strigamia maritima
SMAR013695
N
0.512
Smp_000980
Schistosoma mansoni
Smp_000980
N
0.741
Smp_100090
Schistosoma mansoni
Smp_100090
N
0.478
Smp_103530
Schistosoma mansoni
Smp_103530
N
0.505
SMRZ_0000146101
Schistosoma margrebowiei
SMRZ_0000146101
N
0.505
SMRZ_0000842001
Schistosoma margrebowiei
SMRZ_0000842001
N
0.463
SMRZ_0001808901
Schistosoma margrebowiei
SMRZ_0001808901
N
0.505
SMTD_0001017101
Schistosoma mattheei
SMTD_0001017101
N
0.463
SMTD_0001194601
Schistosoma mattheei
SMTD_0001194601
N
0.741
SMU15002907
Schmidtea mediterranea
SMU15002907
N
0.506
SMU15013231
Schmidtea mediterranea
SMU15013231
N
0.429
SMU15016767
Schmidtea mediterranea
SMU15016767
N
0.501
SMU15027649
Schmidtea mediterranea
SMU15027649
N
0.448
SMU15029911
Schmidtea mediterranea
SMU15029911
N
0.421
SMU15030256
Schmidtea mediterranea
SMU15030256
N
0.600
SMUV_0000232601
Syphacia muris
SMUV_0000232601
N
0.437
SPAL_0001030300
Strongyloides papillosus
SPAL_0001030300
N
0.483
SPU_005572
Strongylocentrotus purpuratus
SPU_005572
N
0.436
SROB_0000153901
Schistosoma rodhaini
SROB_0000153901
N
0.741
SROB_0000500401
Schistosoma rodhaini
SROB_0000500401
N
0.478
SROB_0001061001
Schistosoma rodhaini
SROB_0001061001
N
0.505
SSLN_0000493501
Schistocephalus solidus
SSLN_0000493501
N
0.609
SSLN_0001302101
Schistocephalus solidus
SSLN_0001302101
N
0.418
SSTP_0000371800
Strongyloides stercoralis
SSTP_0000371800
N
0.483
SVE_0494300
Strongyloides venezuelensis
SVE_0494300
N
0.483
T265_10726
Opisthorchis viverrini
T265_10726
N
0.451
T265_12733
Opisthorchis viverrini
T265_12733
N
0.680
T265_14643
Opisthorchis viverrini
T265_14643
N
0.544
TASK_0000460901
Taenia asiatica
TASK_0000460901
N
0.427
TCLT_0000879501
Thelazia callipaeda
TCLT_0000879501
N
0.433
TCNE_0000567001
Toxocara canis
TCNE_0000567001
N
0.433
TELCIR_07111
Teladorsagia circumcincta
TELCIR_07111
N
0.452
tetur02g08260
Tetranychus urticae
tetur02g08260
N
0.480
tetur02g08340
Tetranychus urticae
tetur02g08340
N
0.477
TMUE_s0235000800
Trichuris muris
TMUE_s0235000800
N
0.436
TRE_0000506801
Trichobilharzia regenti
TRE_0000506801
N
0.503
TRE_0000690301
Trichobilharzia regenti
TRE_0000690301
N
0.458
TsM_000088100
Taenia solium
TsM_000088100
N
0.429
TsM_000115400
Taenia solium
TsM_000115400
N
0.633
TTAC_0000225801
Hydatigera taeniaeformis
TTAC_0000225801
N
0.595
TTRE_0000338301
Trichuris trichiura
TTRE_0000338301
N
0.452
WBGene00245261
Onchocerca volvulus
WBGene00245261
N
0.433
YQE_03203
Dendroctonus ponderosae
YQE_03203
N
0.445