CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TMUE_s0002021000
(
Trichuris muris
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
TMUE_s0002021000
T337182_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TMUE_s0002021000
Sox
8
76
PTRPPCAYSLYLKENMPIVAAENPEMAPQKVLRLTSALWQTLSADLKLEYEARAKQLSDEYLIARDAYI
Links
Other
Sox
family TFs
Other
Trichuris muris
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M408DRAFT_53001
Serendipita vermifera
M408DRAFT_53001
N
0.450
M408DRAFT_54305
Serendipita vermifera
M408DRAFT_54305
N
0.450
PIIN_07506
Piriformospora indica
PIIN_07506
N
0.421