CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TTAC_0000939701
(
Hydatigera taeniaeformis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
TTAC_0000939701
T337255_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TTAC_0000939701-mRNA-1
Sox
8
78
PKRALSPYAVFVQSMRDEYKKKNPSASIDFSAFSKECSAKWKALSAKERKKYEDIAAKDKERYQKAMKNYT
TTAC_0000939701-mRNA-1
Sox
95
161
PKKPMSAFFLFCQDERPKVREAHPDWSVGQCAKELASRWEQCKNRSKYDTQASQEKAKYQKAMEKYN
Links
Other
Sox
family TFs
Other
Hydatigera taeniaeformis
TFs
74 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AC135696.1
Rattus norvegicus
ENSRNOG00000058908
N
0.423
A_00070
Schistosoma haematobium
A_00070
N
0.426
CapteG158220
Capitella teleta
CapteG158220
N
0.430
CGI_10023724
Crassostrea gigas
CGI_10023724
N
0.416
csin112095
Clonorchis sinensis
csin112095
N
0.429
DILT_0001006701
Diphyllobothrium latum
DILT_0001006701
N
0.420
ECANG7_07075
Echinococcus canadensis
ECANG7_07075
N
0.717
EmuJ_000941400
Echinococcus multilocularis
EmuJ_000941400
N
0.717
ENSAMXG00000014031
Astyanax mexicanus
ENSAMXG00000014031
N
0.424
ENSCJAG00000008378
Callithrix jacchus
ENSCJAG00000008378
N
0.419
ENSCJAG00000008384
Callithrix jacchus
ENSCJAG00000008384
N
0.417
ENSCJAG00000022832
Callithrix jacchus
ENSCJAG00000022832
N
0.426
ENSCPOG00000003985
Cavia porcellus
ENSCPOG00000003985
N
0.423
ENSDNOG00000005537
Dasypus novemcinctus
ENSDNOG00000005537
N
0.423
ENSECAG00000003655
Equus caballus
ENSECAG00000003655
N
0.423
ENSECAG00000005186
Equus caballus
ENSECAG00000005186
N
0.423
ENSGMOG00000010657
Gadus morhua
ENSGMOG00000010657
N
0.422
ENSMICG00000016224
Microcebus murinus
ENSMICG00000016224
N
0.420
ENSMMUG00000001275
Macaca mulatta
ENSMMUG00000001275
N
0.423
ENSMODG00000004606
Monodelphis domestica
ENSMODG00000004606
N
0.417
ENSMODG00000009238
Monodelphis domestica
ENSMODG00000009238
N
0.423
ENSOARG00000010383
Ovis aries
ENSOARG00000010383
N
0.418
ENSOARG00000011611
Ovis aries
ENSOARG00000011611
N
0.449
ENSOARG00000015382
Ovis aries
ENSOARG00000015382
N
0.418
ENSOARG00000015955
Ovis aries
ENSOARG00000015955
N
0.418
ENSOARG00000017078
Ovis aries
ENSOARG00000017078
N
0.423
ENSOCUG00000004133
Oryctolagus cuniculus
ENSOCUG00000004133
N
0.421
ENSOCUG00000021132
Oryctolagus cuniculus
ENSOCUG00000021132
N
0.418
ENSOCUG00000023449
Oryctolagus cuniculus
ENSOCUG00000023449
N
0.418
ENSOCUG00000027747
Oryctolagus cuniculus
ENSOCUG00000027747
N
0.417
ENSOGAG00000027410
Otolemur garnettii
ENSOGAG00000027410
N
0.420
ENSOGAG00000028411
Otolemur garnettii
ENSOGAG00000028411
N
0.423
ENSOGAG00000032152
Otolemur garnettii
ENSOGAG00000032152
N
0.420
ENSONIG00000005505
Oreochromis niloticus
ENSONIG00000005505
N
0.421
ENSPANG00000005029
Papio anubis
ENSPANG00000005029
N
0.423
ENSPANG00000007527
Papio anubis
ENSPANG00000007527
N
0.418
ENSPANG00000011105
Papio anubis
ENSPANG00000011105
N
0.423
ENSPFOG00000008464
Poecilia formosa
ENSPFOG00000008464
N
0.417
ENSPPYG00000011668
Pongo abelii
ENSPPYG00000011668
N
0.420
ENSSTOG00000000443
Ictidomys tridecemlineatus
ENSSTOG00000000443
N
0.423
ENSXMAG00000006844
Xiphophorus maculatus
ENSXMAG00000006844
N
0.427
Hmg1l1
Rattus norvegicus
ENSRNOG00000034130
N
0.423
Hmg1l1
Rattus norvegicus
ENSRNOG00000051482
N
0.423
HMGB1
Microcebus murinus
ENSMICG00000006213
N
0.423
hmgb1b
Gasterosteus aculeatus
ENSGACG00000011447
N
0.425
Hmgb2
Rattus norvegicus
ENSRNOG00000033321
N
0.418
hmgb2a
Danio rerio
ENSDARG00000029722
N
0.427
Hmgb2l1
Rattus norvegicus
ENSRNOG00000013167
N
0.418
HmN_000761000
Hymenolepis microstoma
HmN_000761000
N
0.642
HNAJ_0000227501
Hymenolepis nana
HNAJ_0000227501
N
0.661
LOC103694516
Rattus norvegicus
ENSRNOG00000049646
N
0.428
LOC103694517
Rattus norvegicus
ENSRNOG00000052269
N
0.426
LOC108349258
Rattus norvegicus
ENSRNOG00000047496
N
0.443
LOC681067
Rattus norvegicus
ENSRNOG00000057013
N
0.433
LOC691030
Rattus norvegicus
ENSRNOG00000057926
N
0.433
MCOS_0000588101
Mesocestoides corti
MCOS_0000588101
N
0.684
Myotis_brandtii_Hmgb2_10018437
Myotis brandtii
Myotis_brandtii_Hmgb2_10018437
N
0.423
PXEA_0000637001
Protopolystoma xenopodis
PXEA_0000637001
N
0.452
RGD1560585
Rattus norvegicus
ENSRNOG00000060534
N
0.444
RGD1561558
Rattus norvegicus
ENSRNOG00000053609
N
0.428
RGD1561694
Rattus norvegicus
ENSRNOG00000029107
N
0.418
RGD1566225
Rattus norvegicus
ENSRNOG00000055742
N
0.444
Sakowv30042012m.g
Saccoglossus kowalevskii
Sakowv30042012m.g
N
0.436
SCUD_0001034301
Schistosoma curassoni
SCUD_0001034301
N
0.426
Sjc_0051340
Schistosoma japonicum
Sjc_0051340
N
0.430
Smp_100090
Schistosoma mansoni
Smp_100090
N
0.420
SMRZ_0000842001
Schistosoma margrebowiei
SMRZ_0000842001
N
0.426
SMTD_0001017101
Schistosoma mattheei
SMTD_0001017101
N
0.426
SROB_0000500401
Schistosoma rodhaini
SROB_0000500401
N
0.420
SSLN_0001302101
Schistocephalus solidus
SSLN_0001302101
N
0.529
T265_10726
Opisthorchis viverrini
T265_10726
N
0.466
TASK_0000795701
Taenia asiatica
TASK_0000795701
N
0.700
TRE_0000690301
Trichobilharzia regenti
TRE_0000690301
N
0.420
TsM_000746700
Taenia solium
TsM_000746700
N
0.700