OSTLU_26716 (Ostreococcus lucimarinus)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 OSTLU_26716 T342784_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.783 0.783
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.783 0.783
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.783 0.783
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.777 0.777
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.777 0.777
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.777 0.777
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.777 0.777
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.777 0.777
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.777 0.777
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.777 0.777
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.777 0.777
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.777 0.777
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.777 0.777
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ABO98877 TBP 31 112
ABO98877 TBP 120 203

Links

Other TBP family TFs
Other Ostreococcus lucimarinus TFs

733 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000239001 Angiostrongylus cantonensis ACAC_0000239001 I 0.000
ACAC_0000409401 Angiostrongylus cantonensis ACAC_0000409401 I 0.000
ACOC_0001326501 Angiostrongylus costaricensis ACOC_0001326501 I 0.000
ANCCAN_18459 Ancylostoma caninum ANCCAN_18459 I 0.000
ANCCEY_03357 Ancylostoma ceylanicum ANCCEY_03357 I 0.000
ANCCEY_05105 Ancylostoma ceylanicum ANCCEY_05105 I 0.000
ASIM_0001301101 Anisakis simplex ASIM_0001301101 I 0.000
ASIM_0001309901 Anisakis simplex ASIM_0001309901 I 0.000
ASIM_0001589901 Anisakis simplex ASIM_0001589901 I 0.000
ASU_01199 Ascaris suum ASU_01199 I 0.000
ASU_10946 Ascaris suum ASU_10946 I 0.000
augustus_masked-nMf.1.1.scaf04518-processed-gene-0.1 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf04518-processed-gene-0.1 N 0.000
Bm14724 Brugia malayi Bm14724 I 0.000
BTMF_0000273701 Brugia timori BTMF_0000273701 I 0.000
BXY_0008800 Bursaphelenchus xylophilus BXY_0008800 I 0.000
BXY_0011200 Bursaphelenchus xylophilus BXY_0011200 I 0.000
BXY_0740200 Bursaphelenchus xylophilus BXY_0740200 N 0.000
BXY_1600300 Bursaphelenchus xylophilus BXY_1600300 I 0.000
CBG06052 Caenorhabditis briggsae CBG06052 I 0.000
CBG07552 Caenorhabditis briggsae CBG07552 I 0.000
CBG19594 Caenorhabditis briggsae CBG19594 I 0.000
CBN18797 Caenorhabditis brenneri CBN18797 I 0.000
CBN19233 Caenorhabditis brenneri CBN19233 I 0.000
CBN26258 Caenorhabditis brenneri CBN26258 I 0.000
CBN31048 Caenorhabditis brenneri CBN31048 I 0.000
CJA13646 Caenorhabditis japonica CJA13646 I 0.000
CRE06661 Caenorhabditis remanei CRE06661 I 0.000
CRE12779 Caenorhabditis remanei CRE12779 I 0.000
CRE15289 Caenorhabditis remanei CRE15289 I 0.000
DICVIV_02348 Dictyocaulus viviparus DICVIV_02348 I 0.000
DME_0000742401 Dracunculus medinensis DME_0000742401 I 0.000
EVEC_0000349901 Enterobius vermicularis EVEC_0000349901 I 0.000
genemark-nMf.1.1.scaf00140-processed-gene-0.6 Meloidogyne floridensis genemark-nMf.1.1.scaf00140-processed-gene-0.6 I 0.000
GPLIN_000268400 Globodera pallida GPLIN_000268400 I 0.000
Hba_14958 Heterorhabditis bacteriophora Hba_14958 I 0.000
HCOI00435200 Haemonchus contortus HCOI00435200 I 0.000
HCOI00769300 Haemonchus contortus HCOI00769300 I 0.000
HCOI01406200 Haemonchus contortus HCOI01406200 I 0.000
HCOI02077900 Haemonchus contortus HCOI02077900 I 0.000
HPBE_0001043101 Heligmosomoides bakeri HPBE_0001043101 I 0.000
HPLM_0001680701 Haemonchus placei HPLM_0001680701 I 0.000
L596_g20569 Steinernema carpocapsae L596_g20569 I 0.000
L596_g25297 Steinernema carpocapsae L596_g25297 I 0.000
L596_g25666 Steinernema carpocapsae L596_g25666 I 0.000
L596_g3812 Steinernema carpocapsae L596_g3812 I 0.000
L889_g5777 Steinernema feltiae L889_g5777 I 0.000
L889_g6303 Steinernema feltiae L889_g6303 I 0.000
L889_g8361 Steinernema feltiae L889_g8361 I 0.000
L892_g21738 Steinernema scapterisci L892_g21738 I 0.000
L892_g650 Steinernema scapterisci L892_g650 I 0.000
L893_g27196 Steinernema glaseri L893_g27196 I 0.000
L893_g29388 Steinernema glaseri L893_g29388 I 0.000
L893_g29555 Steinernema glaseri L893_g29555 I 0.000
L893_g32432 Steinernema glaseri L893_g32432 I 0.000
L898_g10316 Steinernema monticolum L898_g10316 I 0.000
L898_g23965 Steinernema monticolum L898_g23965 I 0.000
L898_g24498 Steinernema monticolum L898_g24498 I 0.000
LOAG_18352 Loa loa LOAG_18352 I 0.000
maker-nMf.1.1.scaf07948-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf07948-snap-gene-0.4 I 0.000
MhA1_Contig217.frz3.gene7 Meloidogyne hapla MhA1_Contig217.frz3.gene7 I 0.000
MhA1_Contig795.frz3.fgene1 Meloidogyne hapla MhA1_Contig795.frz3.fgene1 N 0.000
MhA1_Contig984.frz3.gene20 Meloidogyne hapla MhA1_Contig984.frz3.gene20 I 0.000
Minc01725 Meloidogyne incognita Minc01725 I 0.000
Minc13525 Meloidogyne incognita Minc13525 I 0.000
Minc15185 Meloidogyne incognita Minc15185 N 0.000
nAv.1.0.1.g09896 Acanthocheilonema viteae nAv.1.0.1.g09896 I 0.000
NBR_0001432001 Nippostrongylus brasiliensis NBR_0001432001 I 0.000
nDi.2.2.2.g05078 Dirofilaria immitis nDi.2.2.2.g05078 I 0.000
NECAME_04545 Necator americanus NECAME_04545 I 0.000
NECAME_12696 Necator americanus NECAME_12696 I 0.000
nhr-119 Caenorhabditis elegans WBGene00003709 I 0.000
nhr-3 Caenorhabditis elegans WBGene00003602 D 0.000
nhr-7 Caenorhabditis elegans WBGene00003606 D 0.000
nLs.2.1.2.g05858 Litomosoides sigmodontis nLs.2.1.2.g05858 I 0.000
nOo.2.0.1.g05901 Onchocerca ochengi nOo.2.0.1.g05901 I 0.000
OESDEN_02652 Oesophagostomum dentatum OESDEN_02652 I 0.000
OESDEN_02943 Oesophagostomum dentatum OESDEN_02943 I 0.000
OFLC_0000776201 Onchocerca flexuosa OFLC_0000776201 I 0.000
PEQ_0000633601 Parascaris equorum PEQ_0000633601 I 0.000
PPA20304 Pristionchus pacificus PPA20304 I 0.000
PTRK_0000497300 Parastrongyloides trichosuri PTRK_0000497300 I 0.000
PTRK_0000510500 Parastrongyloides trichosuri PTRK_0000510500 I 0.000
SMUV_0000428701 Syphacia muris SMUV_0000428701 I 0.000
SMUV_0000859101 Syphacia muris SMUV_0000859101 I 0.000
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 I 0.000
SPAL_0000110800 Strongyloides papillosus SPAL_0000110800 I 0.000
SPAL_0001436300 Strongyloides papillosus SPAL_0001436300 I 0.000
SSTP_0000831700 Strongyloides stercoralis SSTP_0000831700 I 0.000
SSTP_0001234400 Strongyloides stercoralis SSTP_0001234400 I 0.000
SVE_0137800 Strongyloides venezuelensis SVE_0137800 I 0.000
SVE_0301400 Strongyloides venezuelensis SVE_0301400 I 0.000
TCLT_0000079701 Thelazia callipaeda TCLT_0000079701 I 0.000
TCNE_0001780601 Toxocara canis TCNE_0001780601 I 0.000
TELCIR_01879 Teladorsagia circumcincta TELCIR_01879 I 0.000
TELCIR_05080 Teladorsagia circumcincta TELCIR_05080 I 0.000
TELCIR_07363 Teladorsagia circumcincta TELCIR_07363 I 0.000
WBGene00241910 Onchocerca volvulus WBGene00241910 I 0.000
WUBG_08518 Wuchereria bancrofti WUBG_08518 I 0.000