CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PITG_12304
(
Phytophthora infestans
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00352 (TBP)
IPR000814
PITG_12304
T342829_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PITG_12304T0
TBP
1
69
MRFDLTNLLVKSHRRAELVPKKNCILMKLHNPKATAMLFANGKLVCTGAETEDAIKNAARRFTQVIQKM
PITG_12304T0
TBP
78
160
DFKIQNVVGTCDMGFRVLVEALAFAHSDRCTYEPELYPALIYRLEKPQVKVLVFVSGKVVFTDSKEPRELYSACEAIFPVCCY
Links
Other
TBP
family TFs
Other
Phytophthora infestans
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh1_pg.C_110148
Phytophthora capsici
estExt_fgenesh1_pg.C_110148
N
0.844
F443_17630
Phytophthora parasitica
F443_17630
N
0.947
fgenesh_scip_prom.28083.6999
Phytophthora lateralis
fgenesh_scip_prom.28083.6999
N
0.928
fgenesh_scip_prom.46568.971
Phytophthora kernoviae
fgenesh_scip_prom.46568.971
N
0.743
HpaG807837
Hyaloperonospora arabidopsidis
HpaG807837
N
0.868
maker-pag1_scaffold_59-fgenesh-gene-0.7
Pythium aphanidermatum
maker-pag1_scaffold_59-fgenesh-gene-0.7
N
0.704
maker-pir_contig_233-fgenesh-gene-0.3
Pythium irregulare
maker-pir_contig_233-fgenesh-gene-0.3
N
0.803
maker-piw_contig_55-fgenesh-gene-0.12
Pythium iwayamai
maker-piw_contig_55-fgenesh-gene-0.12
N
0.723
maker-pve_contig_691-snap-gene-0.13
Pythium vexans
maker-pve_contig_691-snap-gene-0.13
N
0.770
Phyra84970
Phytophthora ramorum
Phyra84970
N
0.934
Physo129327
Phytophthora sojae
Physo129327
N
0.860
PYU1_G010143
Pythium ultimum
PYU1_G010143
N
0.796