Bo01002s040 (Brassica oleracea)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 Bo01002s040 T352074_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY38
M00901_2.00 		Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY38 		0.863 0.797
WRKY62
M02561_2.00 		Arabidopsis thaliana
TRGTCAAM
KTTGACYA		 PBM
Weirauch et al.(2014)
pTH8246 		0.841 0.627
WRKY63
M02546_2.00 		Arabidopsis thaliana
NGGTCAAN
NTTGACCN		 PBM
Weirauch et al.(2014)
pTH8182 		0.833 0.644
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo01002s040.1 WRKY 105 165

Links

Other WRKY family TFs
Other Brassica oleracea TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29729.m002369 Ricinus communis 29729.m002369 I 0.809
Al_scaffold_0002_1233 Arabidopsis lyrata Al_scaffold_0002_1233 I 0.829
AMTR_s00077p00103880 Amborella trichopoda AMTR_s00077p00103880 I 0.810
BGIOSGA012571 Oryza indica BGIOSGA012571 I 0.815
BGIOSGA017860 Oryza indica BGIOSGA017860 I 0.811
Bo2g024040 Brassica oleracea Bo2g024040 I 0.866
Bo2g095820 Brassica oleracea Bo2g095820 I 0.815
Bo5g068250 Brassica oleracea Bo5g068250 I 0.833
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I 0.826
Bostr.25463s0359 Boechera stricta Bostr.25463s0359 I 0.817
Bostr.26527s0018 Boechera stricta Bostr.26527s0018 I 0.853
Bostr.26959s0261 Boechera stricta Bostr.26959s0261 I 0.821
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.836
Bostr.5022s0087 Boechera stricta Bostr.5022s0087 I 0.809
Bostr.6251s0160 Boechera stricta Bostr.6251s0160 I 0.834
Bra002421 Brassica rapa Bra002421 I 0.893
Bra008454 Brassica rapa Bra008454 I 0.816
Bra008459 Brassica rapa Bra008459 I 0.815
Bra020196 Brassica rapa Bra020196 I 0.866
Bra020197 Brassica rapa Bra020197 I 0.866
Bra023211 Brassica rapa Bra023211 I 0.833
Bra028918 Brassica rapa Bra028918 I 0.844
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I 0.830
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I 0.832
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I 0.864
Carubv10002472m.g Capsella rubella Carubv10002472m.g I 0.864
Carubv10012720m.g Capsella rubella Carubv10012720m.g I 0.830
Carubv10021420m.g Capsella rubella Carubv10021420m.g I 0.832
Carubv10021860m.g Capsella rubella Carubv10021860m.g I 0.827
Carubv10021899m.g Capsella rubella Carubv10021899m.g I 0.835
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.829
Carubv10022162m.g Capsella rubella Carubv10022162m.g I 0.812
cassava25180.valid.m1 Manihot esculenta cassava25180.valid.m1 I 0.812
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I 0.814
cassava43790.valid.m1 Manihot esculenta cassava43790.valid.m1 I 0.810
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I 0.811
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I 0.811
Ca_12915 Cicer arietinum Ca_12915 I 0.825
Ca_18932 Cicer arietinum Ca_18932 I 0.832
Cla018337 Citrullus lanatus Cla018337 I 0.824
Cucsa.177060 Cucumis sativus Cucsa.177060 I 0.817
Eucgr.K01289 Eucalyptus grandis Eucgr.K01289 I 0.827
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.819
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.816
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.819
GLYMA09G41050 Glycine max GLYMA09G41050 I 0.814
GLYMA13G34240 Glycine max GLYMA13G34240 I 0.810
GLYMA13G34251 Glycine max GLYMA13G34251 I 0.812
GLYMA13G34261 Glycine max GLYMA13G34261 I 0.815
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.821
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.816
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I 0.816
LPERR05G16170 Leersia perrieri LPERR05G16170 I 0.811
MTR_0002s1250 Medicago truncatula MTR_0002s1250 I 0.820
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.836
MTR_2g075680 Medicago truncatula MTR_2g075680 I 0.826
MTR_2g075690 Medicago truncatula MTR_2g075690 I 0.822
MTR_2g075700 Medicago truncatula MTR_2g075700 I 0.819
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.836
MTR_7g073380 Medicago truncatula MTR_7g073380 I 0.810
MTR_8g005750 Medicago truncatula MTR_8g005750 I 0.835
OB05G17240 Oryza brachyantha OB05G17240 I 0.811
OB05G27850 Oryza brachyantha OB05G27850 I 0.819
OBART03G16400 Oryza barthii OBART03G16400 I 0.815
OBART05G20330 Oryza barthii OBART05G20330 I 0.817
OGLUM03G16780 Oryza glumaepatula OGLUM03G16780 I 0.815
OGLUM05G21440 Oryza glumaepatula OGLUM05G21440 I 0.817
OGLUM05G21470 Oryza glumaepatula OGLUM05G21470 I 0.809
OGLUM05G21510 Oryza glumaepatula OGLUM05G21510 I 0.817
OLONG_024544 Oryza longistaminata OLONG_024544 I 0.815
OLONG_027124 Oryza longistaminata OLONG_027124 I 0.809
OMERI03G14670 Oryza meridionalis OMERI03G14670 I 0.815
OMERI05G18250 Oryza meridionalis OMERI05G18250 I 0.811
ONIVA03G17390 Oryza nivara ONIVA03G17390 I 0.815
ONIVA05G21460 Oryza nivara ONIVA05G21460 I 0.811
OPUNC05G18000 Oryza punctata OPUNC05G18000 I 0.819
OPUNC05G18030 Oryza punctata OPUNC05G18030 I 0.813
ORGLA05G0177400 Oryza glaberrima ORGLA05G0177400 I 0.817
ORUFI03G16960 Oryza rufipogon ORUFI03G16960 I 0.815
ORUFI05G21600 Oryza rufipogon ORUFI05G21600 I 0.811
OS03G0335200 Oryza sativa OS03G0335200 I 0.815
OS05G0478800 Oryza sativa OS05G0478800 I 0.811
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I 0.816
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I 0.828
PGSC0003DMG400027582 Solanum tuberosum PGSC0003DMG400027582 I 0.818
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I 0.822
Pm003014 Prunus mume Pm003014 I 0.812
POPTR_0006s10950 Populus trichocarpa POPTR_0006s10950 I 0.811
POPTR_0016s14490 Populus trichocarpa POPTR_0016s14490 I 0.818
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.812
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I 0.814
SapurV1A.0356s0010 Salix purpurea SapurV1A.0356s0010 I 0.808
SapurV1A.0914s0120 Salix purpurea SapurV1A.0914s0120 I 0.808
Si025181m.g Setaria italica Si025181m.g I 0.813
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I 0.822
TCM_019689 Theobroma cacao TCM_019689 I 0.812
Thhalv10000686m.g Eutrema salsugineum Thhalv10000686m.g I 0.814
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.844
Thhalv10015295m.g Eutrema salsugineum Thhalv10015295m.g I 0.855
Thhalv10029232m.g Eutrema salsugineum Thhalv10029232m.g I 0.810
WRKY38 Arabidopsis thaliana AT5G22570 D 0.863
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.863
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.841
WRKY62 Arabidopsis thaliana AT5G01900 D 0.841
WRKY63 Arabidopsis thaliana AT1G66600 D 0.833
WRKY64 Arabidopsis thaliana AT1G66560 I 0.840
WRKY66 Arabidopsis thaliana AT1G80590 I 0.825
WRKY67 Arabidopsis thaliana AT1G66550 I 0.828
WRKY67 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000969 I 0.824