Bra008456 (Brassica rapa)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 Bra008456 T352253_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY63
M02546_2.00 		Arabidopsis thaliana
NGGTCAAN
NTTGACCN		 PBM
Weirauch et al.(2014)
pTH8182 		0.823 0.740
WRKY62
M02561_2.00 		Arabidopsis thaliana
TRGTCAAM
KTTGACYA		 PBM
Weirauch et al.(2014)
pTH8246 		0.814 0.600
WRKY38
M00901_2.00 		Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY38 		0.813 0.620
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra008456.1-P WRKY 102 151

Links

Other WRKY family TFs
Other Brassica rapa TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0002_1233 Arabidopsis lyrata Al_scaffold_0002_1233 I 0.835
Bo2g024040 Brassica oleracea Bo2g024040 I 0.809
Bo2g095820 Brassica oleracea Bo2g095820 I 0.860
Bo5g068250 Brassica oleracea Bo5g068250 I 0.820
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I 0.845
Bostr.25463s0359 Boechera stricta Bostr.25463s0359 I 0.821
Bostr.26527s0018 Boechera stricta Bostr.26527s0018 I 0.809
Bostr.26959s0261 Boechera stricta Bostr.26959s0261 I 0.821
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.826
Bostr.6251s0160 Boechera stricta Bostr.6251s0160 I 0.819
Bra008454 Brassica rapa Bra008454 I 0.847
Bra008459 Brassica rapa Bra008459 I 0.860
Bra020196 Brassica rapa Bra020196 I 0.809
Bra020197 Brassica rapa Bra020197 I 0.809
Bra023211 Brassica rapa Bra023211 I 0.820
Bra028918 Brassica rapa Bra028918 I 0.819
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I 0.823
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I 0.830
Carubv10012720m.g Capsella rubella Carubv10012720m.g I 0.823
Carubv10021420m.g Capsella rubella Carubv10021420m.g I 0.830
Carubv10021860m.g Capsella rubella Carubv10021860m.g I 0.828
Carubv10021899m.g Capsella rubella Carubv10021899m.g I 0.830
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.833
Carubv10022162m.g Capsella rubella Carubv10022162m.g I 0.813
Thhalv10000686m.g Eutrema salsugineum Thhalv10000686m.g I 0.858
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.819
Thhalv10015295m.g Eutrema salsugineum Thhalv10015295m.g I 0.818
Thhalv10029232m.g Eutrema salsugineum Thhalv10029232m.g I 0.855
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.813
WRKY38 Arabidopsis thaliana AT5G22570 D 0.813
WRKY62 Arabidopsis thaliana AT5G01900 D 0.814
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.814
WRKY63 Arabidopsis thaliana AT1G66600 D 0.823
WRKY64 Arabidopsis thaliana AT1G66560 I 0.823
WRKY66 Arabidopsis thaliana AT1G80590 I 0.833
WRKY67 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000969 I 0.831
WRKY67 Arabidopsis thaliana AT1G66550 I 0.827