CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GRMZM2G111711 *(Zea mays)* WRKY
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF03106 (WRKY)	IPR003657	GRMZM2G111711	T352837_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
WRKY60 M02551_2.00	Arabidopsis thaliana	NYGGTCAAMNN	NNKTTGACCRN	PBM Weirauch et al.(2014) pTH7379	0.862	0.814
WRKY18 M02560_2.00	Arabidopsis thaliana	NNRGTCAANN	NNTTGACYNN	PBM Weirauch et al.(2014) pTH7360	0.860	0.847
WRKY18 M00900_2.00	Arabidopsis thaliana	NVGTCNN	NNGACBN	PBM Franco-Zorrilla et al.(2014) WRKY18	0.860	0.847
WRKY18 M07416_2.00	Arabidopsis thaliana	NNHRGTCAASR	YSTTGACYDNN	Dap-seq OMalley et al.(2016) WRKY18_col_a	0.860	0.847
WRKY18 M07417_2.00	Arabidopsis thaliana	NNNHWAGTCAANR	YNTTGACTWDNNN	Dap-seq OMalley et al.(2016) WRKY18_colamp_a	0.860	0.847
WRKY18 M11465_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY18_Q2	0.860	0.847
WRKY40 M02548_2.00	Arabidopsis thaliana	NRGTCAWN	NWTGACYN	PBM Weirauch et al.(2014) pTH8398	0.859	0.780
WRKY40 M07379_2.00	Arabidopsis thaliana	NNNAAAGTCAAVR	YBTTGACTTTNNN	Dap-seq OMalley et al.(2016) WRKY40_colamp_a	0.859	0.780
WRKY40 M07380_2.00	Arabidopsis thaliana	NNVAAAGTCAAVRNH	DNYBTTGACTTTBNN	Dap-seq OMalley et al.(2016) WRKY40_col	0.859	0.780
WRKY40 M08180_2.00	Arabidopsis thaliana	NNAGTCAANN	NNTTGACTNN	ChIP-seq Mathelier et al.(2014) MA1085.2	0.859	0.780
WRKY42 M07404_2.00	Arabidopsis thaliana	NDWRGTCAACDNNNNDNNHNN	NNDNNHNNNNHGTTGACYWHN	Dap-seq OMalley et al.(2016) WRKY42_col_a	0.815	0.695
WRKY42 M07405_2.00	Arabidopsis thaliana	HNDNNNWRGTCAACKNHNDD	HHNDNMGTTGACYWNNNHND	Dap-seq OMalley et al.(2016) WRKY42_colamp_a	0.815	0.695
WRKY6 M07377_2.00	Arabidopsis thaliana	DNNNHNDHNHNRGTCAACG	CGTTGACYNDNDHNDNNNH	Dap-seq OMalley et al.(2016) WRKY6_col_a	0.814	0.678
WRKY6 M07378_2.00	Arabidopsis thaliana	NNHNWRGTCAACKNH	DNMGTTGACYWNDNN	Dap-seq OMalley et al.(2016) WRKY6_colamp_a	0.814	0.678
WRKY31 M07408_2.00	Arabidopsis thaliana	NNNNHNNNNNDRGTCAACG	CGTTGACYHNNNNNDNNNN	Dap-seq OMalley et al.(2016) WRKY31_col_a	0.813	0.678
WRKY31 M07409_2.00	Arabidopsis thaliana	NHWRGTCAACKNH	DNMGTTGACYWDN	Dap-seq OMalley et al.(2016) WRKY31_colamp_a	0.813	0.678
WRKY47 M00732_2.00	Arabidopsis thaliana	NNRGTCAACKN	NMGTTGACYNN	PBM Chang et al.(2013) pTH7913	0.811	0.678
WRKY47 M07402_2.00	Arabidopsis thaliana	WRGTCAAMGNHVDK	MHBDNCKTTGACYW	Dap-seq OMalley et al.(2016) WRKY47_col_a	0.811	0.678
WRKY47 M07403_2.00	Arabidopsis thaliana	NNNHWRGTCAACKNHNNNN	NNNNDNMGTTGACYWDNNN	Dap-seq OMalley et al.(2016) WRKY47_colamp_a	0.811	0.678
For this family, TFs with SR scores > 0.808* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
GRMZM2G111711_P01	WRKY	201	259	KDGYQWRKYGQKVTKDNPCPRAYFRCSFAPSCPVKKKVQRSADDRTILVATYEGDHNHA

Links
Other WRKY family TFs
Other *Zea mays* TFs

771 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
AALB001180	Anopheles albimanus	AALB001180	N	0.000
AARA010780	Anopheles arabiensis	AARA010780	I	0.000
ACEP20052	Atta cephalotes	ACEP20052	N	0.000
ACHR006597	Anopheles christyi	ACHR006597	N	0.000
ADIR011363	Anopheles dirus	ADIR011363	I	0.000
AEPI004836	Anopheles epiroticus	AEPI004836	N	0.000
AFUN008227	Anopheles funestus	AFUN008227	I	0.000
AMAM006507	Anopheles maculatus	AMAM006507	N	0.000
AMIN007195	Anopheles minimus	AMIN007195	I	0.000
BGLB012024	Biomphalaria glabrata	BGLB012024	N	0.000
Cflo_00736--XP_001122746.1_APIME	Camponotus floridanus	Cflo_00736--XP_001122746.1_APIME	I	0.000
CLEC006156	Cimex lectularius	CLEC006156	I	0.000
CPIJ009205	Culex quinquefasciatus	CPIJ009205	N	0.000
CpipJ_CPIJ009205	Culex pipiens	CpipJ_CPIJ009205	N	0.000
KGM_19741	Danaus plexippus	KGM_19741	I	0.000
L798_15746	Zootermopsis nevadensis	L798_15746	I	0.000
LDEC012325	Leptinotarsa decemlineata	LDEC012325	N	0.000
LLOJ000107	Lutzomyia longipalpis	LLOJ000107	N	0.000
MESCA000012	Megaselia scalaris	MESCA000012	I	0.000
PAX5	Homo sapiens	ENSG00000196092	D	0.000
pax8	Xenopus tropicalis	XB-GENE-483693	I	0.000
PHUM404840	Pediculus humanus	PHUM404840	I	0.000
YQE_05417	Dendroctonus ponderosae	YQE_05417	I	0.000

GRMZM2G111711 (Zea mays) WRKY

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

771 Related TFs

GRMZM2G111711 **(Zea mays)
WRKY**