ORGLA06G0191100 (Oryza glaberrima)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 ORGLA06G0191100 T354030_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY40
M02548_2.00 		Arabidopsis thaliana
NRGTCAWN
NWTGACYN		 PBM
Weirauch et al.(2014)
pTH8398 		0.862 0.797
WRKY40
M07379_2.00 		Arabidopsis thaliana
NNNAAAGTCAAVR
YBTTGACTTTNNN		 Dap-seq
OMalley et al.(2016)
WRKY40_colamp_a 		0.862 0.797
WRKY40
M07380_2.00 		Arabidopsis thaliana
NNVAAAGTCAAVRNH
DNYBTTGACTTTBNN		 Dap-seq
OMalley et al.(2016)
WRKY40_col 		0.862 0.797
WRKY40
M08180_2.00 		Arabidopsis thaliana
NNAGTCAANN
NNTTGACTNN		 ChIP-seq
Mathelier et al.(2014)
MA1085.2 		0.862 0.797
WRKY60
M02551_2.00 		Arabidopsis thaliana
NYGGTCAAMNN
NNKTTGACCRN		 PBM
Weirauch et al.(2014)
pTH7379 		0.860 0.797
WRKY18
M02560_2.00 		Arabidopsis thaliana
NNRGTCAANN
NNTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7360 		0.858 0.831
WRKY18
M00900_2.00 		Arabidopsis thaliana
NVGTCNN
NNGACBN		 PBM
Franco-Zorrilla et al.(2014)
WRKY18 		0.858 0.831
WRKY18
M07416_2.00 		Arabidopsis thaliana
NNHRGTCAASR
YSTTGACYDNN		 Dap-seq
OMalley et al.(2016)
WRKY18_col_a 		0.858 0.831
WRKY18
M07417_2.00 		Arabidopsis thaliana
NNNHWAGTCAANR
YNTTGACTWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY18_colamp_a 		0.858 0.831
WRKY18
M11465_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRKY18_Q2 		0.858 0.831
WRKY42
M07404_2.00 		Arabidopsis thaliana
NDWRGTCAACDNNNNDNNHNN
NNDNNHNNNNHGTTGACYWHN		 Dap-seq
OMalley et al.(2016)
WRKY42_col_a 		0.812 0.661
WRKY42
M07405_2.00 		Arabidopsis thaliana
HNDNNNWRGTCAACKNHNDD
HHNDNMGTTGACYWNNNHND		 Dap-seq
OMalley et al.(2016)
WRKY42_colamp_a 		0.812 0.661
WRKY6
M07377_2.00 		Arabidopsis thaliana
DNNNHNDHNHNRGTCAACG
CGTTGACYNDNDHNDNNNH		 Dap-seq
OMalley et al.(2016)
WRKY6_col_a 		0.811 0.644
WRKY6
M07378_2.00 		Arabidopsis thaliana
NNHNWRGTCAACKNH
DNMGTTGACYWNDNN		 Dap-seq
OMalley et al.(2016)
WRKY6_colamp_a 		0.811 0.644
WRKY47
M00732_2.00 		Arabidopsis thaliana
NNRGTCAACKN
NMGTTGACYNN		 PBM
Chang et al.(2013)
pTH7913 		0.810 0.661
WRKY47
M07402_2.00 		Arabidopsis thaliana
WRGTCAAMGNHVDK
MHBDNCKTTGACYW		 Dap-seq
OMalley et al.(2016)
WRKY47_col_a 		0.810 0.661
WRKY47
M07403_2.00 		Arabidopsis thaliana
NNNHWRGTCAACKNHNNNN
NNNNDNMGTTGACYWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY47_colamp_a 		0.810 0.661
WRKY31
M07408_2.00 		Arabidopsis thaliana
NNNNHNNNNNDRGTCAACG
CGTTGACYHNNNNNDNNNN		 Dap-seq
OMalley et al.(2016)
WRKY31_col_a 		0.809 0.644
WRKY31
M07409_2.00 		Arabidopsis thaliana
NHWRGTCAACKNH
DNMGTTGACYWDN		 Dap-seq
OMalley et al.(2016)
WRKY31_colamp_a 		0.809 0.644
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA06G0191100.1 WRKY 248 306

Links

Other WRKY family TFs
Other Oryza glaberrima TFs

778 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28623.m000400 Ricinus communis 28623.m000400 I 0.000
29728.m000815 Ricinus communis 29728.m000815 I 0.000
ANAC076 Arabidopsis thaliana AT4G36160 D 0.000
ANAC076 Arabidopsis lyrata fgenesh2_kg.7__450__AT4G36160.1 I 0.000
ANAC076 Vitis vinifera VIT_04s0023g03110 I 0.000
ANAC105 Arabidopsis lyrata fgenesh2_kg.8__2792__AT5G66300.1 I 0.000
Aquca_006_00155 Aquilegia coerulea Aquca_006_00155 I 0.000
Aquca_007_00369 Aquilegia coerulea Aquca_007_00369 I 0.000
BGIOSGA011539 Oryza indica BGIOSGA011539 I 0.000
BGIOSGA033343 Oryza indica BGIOSGA033343 I 0.000
Bo1g005810 Brassica oleracea Bo1g005810 I 0.000
Bo2g075130 Brassica oleracea Bo2g075130 I 0.000
Bo3g093950 Brassica oleracea Bo3g093950 I 0.000
Bo6g114440 Brassica oleracea Bo6g114440 I 0.000
Bo7g011640 Brassica oleracea Bo7g011640 I 0.000
Bo7g065010 Brassica oleracea Bo7g065010 I 0.000
Bo7g117820 Brassica oleracea Bo7g117820 I 0.000
Bostr.0568s0042 Boechera stricta Bostr.0568s0042 I 0.000
Bostr.10273s0160 Boechera stricta Bostr.10273s0160 I 0.000
Bostr.18351s0273 Boechera stricta Bostr.18351s0273 I 0.000
Bostr.7867s1483 Boechera stricta Bostr.7867s1483 I 0.000
Bra007996 Brassica rapa Bra007996 I 0.000
Bra011667 Brassica rapa Bra011667 I 0.000
Bra012065 Brassica rapa Bra012065 I 0.000
Bra016098 Brassica rapa Bra016098 I 0.000
Bra017750 Brassica rapa Bra017750 I 0.000
Cagra.10427s0040 Capsella grandiflora Cagra.10427s0040 I 0.000
Cagra.4006s0034 Capsella grandiflora Cagra.4006s0034 I 0.000
Cagra.4734s0006 Capsella grandiflora Cagra.4734s0006 I 0.000
Carubv10004997m.g Capsella rubella Carubv10004997m.g I 0.000
Carubv10020645m.g Capsella rubella Carubv10020645m.g I 0.000
Carubv10026898m.g Capsella rubella Carubv10026898m.g I 0.000
cassava24947.valid.m1 Manihot esculenta cassava24947.valid.m1 I 0.000
cassava25360.m1 Manihot esculenta cassava25360.m1 I 0.000
cassava26615.m1 Manihot esculenta cassava26615.m1 I 0.000
cassava40790.m1 Manihot esculenta cassava40790.m1 I 0.000
Ca_01981 Cicer arietinum Ca_01981 I 0.000
Ca_04309 Cicer arietinum Ca_04309 I 0.000
Ciclev10003255m.g Citrus clementina Ciclev10003255m.g I 0.000
Ciclev10026114m.g Citrus clementina Ciclev10026114m.g I 0.000
Cla014492 Citrullus lanatus Cla014492 I 0.000
Cla016604 Citrullus lanatus Cla016604 I 0.000
Cucsa.043420 Cucumis sativus Cucsa.043420 I 0.000
Cucsa.240650 Cucumis sativus Cucsa.240650 I 0.000
Eucgr.F02615 Eucalyptus grandis Eucgr.F02615 I 0.000
Eucgr.I02366 Eucalyptus grandis Eucgr.I02366 I 0.000
evm.TU.contig_30558 Carica papaya evm.TU.contig_30558 I 0.000
evm.TU.supercontig_6.226 Carica papaya evm.TU.supercontig_6.226 I 0.000
F775_20020 Aegilops tauschii F775_20020 I 0.000
gene14869-v1.0-hybrid Fragaria vesca gene14869-v1.0-hybrid I 0.000
GLYMA01G37310 Glycine max GLYMA01G37310 I 0.000
GLYMA02G05620 Glycine max GLYMA02G05620 I 0.000
GLYMA10G36050 Glycine max GLYMA10G36050 I 0.000
GLYMA11G07990 Glycine max GLYMA11G07990 I 0.000
GLYMA16G24200 Glycine max GLYMA16G24200 I 0.000
GLYMA20G31551 Glycine max GLYMA20G31551 I 0.000
Gorai.003G010700 Gossypium raimondii Gorai.003G010700 I 0.000
Gorai.007G048000 Gossypium raimondii Gorai.007G048000 I 0.000
Gorai.007G196400 Gossypium raimondii Gorai.007G196400 I 0.000
Gorai.008G063600 Gossypium raimondii Gorai.008G063600 I 0.000
Gorai.013G140700 Gossypium raimondii Gorai.013G140700 I 0.000
GRMZM2G025642 Zea mays GRMZM2G025642 I 0.000
GSMUA_Achr11G03040_001 Musa acuminata GSMUA_Achr11G03040_001 I 0.000
GSMUA_Achr8G12100_001 Musa acuminata GSMUA_Achr8G12100_001 I 0.000
LjSGA_075859.1 Lotus japonicus LjSGA_075859.1 I 0.000
LPERR03G01990 Leersia perrieri LPERR03G01990 I 0.000
Lus10017915.g Linum usitatissimum Lus10017915.g I 0.000
Lus10028372.g Linum usitatissimum Lus10028372.g I 0.000
Lus10041822.g Linum usitatissimum Lus10041822.g I 0.000
MDP0000136180 Malus domestica MDP0000136180 I 0.000
MDP0000176447 Malus domestica MDP0000176447 I 0.000
MDP0000298965 Malus domestica MDP0000298965 I 0.000
MDP0000299959 Malus domestica MDP0000299959 I 0.000
MDP0000849944 Malus domestica MDP0000849944 I 0.000
MDP0000902822 Malus domestica MDP0000902822 I 0.000
mgf009391m Mimulus guttatus mgf009391m I 0.000
mgf022574m Mimulus guttatus mgf022574m I 0.000
mgf026153m Mimulus guttatus mgf026153m I 0.000
MLOC_56769 Hordeum vulgare MLOC_56769 I 0.000
MTR_1g096430 Medicago truncatula MTR_1g096430 I 0.000
MTR_5g021710 Medicago truncatula MTR_5g021710 I 0.000
NAC030 Arabidopsis thaliana AT1G71930 D 0.000
NAC037 Arabidopsis thaliana AT2G18060 D 0.000
NAC105 Arabidopsis thaliana AT5G66300 D 0.000
OB03G12100 Oryza brachyantha OB03G12100 I 0.000
OB10G23740 Oryza brachyantha OB10G23740 I 0.000
OBART03G02180 Oryza barthii OBART03G02180 I 0.000
OGLUM03G02130 Oryza glumaepatula OGLUM03G02130 I 0.000
OLONG_011521 Oryza longistaminata OLONG_011521 I 0.000
OMERI03G02020 Oryza meridionalis OMERI03G02020 I 0.000
ONIVA03G01790 Oryza nivara ONIVA03G01790 I 0.000
OPUNC03G01920 Oryza punctata OPUNC03G01920 I 0.000
orange1.1g019821m.g Citrus sinensis orange1.1g019821m.g I 0.000
orange1.1g021187m.g Citrus sinensis orange1.1g021187m.g I 0.000
ORGLA03G0019500 Oryza glaberrima ORGLA03G0019500 I 0.000
ORUFI03G01920 Oryza rufipogon ORUFI03G01920 I 0.000
OS10G0532000 Oryza sativa OS10G0532000 I 0.000
Pavir.Ib00161 Panicum virgatum Pavir.Ib00161 I 0.000
Pavir.J32898 Panicum virgatum Pavir.J32898 I 0.000
PDK_20s1306451g001 Phoenix dactylifera PDK_20s1306451g001 I 0.000
PDK_20s1503311g001 Phoenix dactylifera PDK_20s1503311g001 I 0.000
PGSC0003DMG400000887 Solanum tuberosum PGSC0003DMG400000887 I 0.000
PGSC0003DMG400026079 Solanum tuberosum PGSC0003DMG400026079 I 0.000
PGSC0003DMG401003552 Solanum tuberosum PGSC0003DMG401003552 I 0.000
PK11173.1 Cannabis sativa PK11173.1 I 0.000
Pm022184 Prunus mume Pm022184 I 0.000
Pm026735 Prunus mume Pm026735 I 0.000
POPTR_0005s11870 Populus trichocarpa POPTR_0005s11870 I 0.000
POPTR_0007s13910 Populus trichocarpa POPTR_0007s13910 I 0.000
POPTR_0013s11740 Populus trichocarpa POPTR_0013s11740 I 0.000
POPTR_0019s11330 Populus trichocarpa POPTR_0019s11330 I 0.000
PRUPE_ppa016236mg Prunus persica PRUPE_ppa016236mg I 0.000
PRUPE_ppa022264mg Prunus persica PRUPE_ppa022264mg I 0.000
SapurV1A.0166s0460 Salix purpurea SapurV1A.0166s0460 I 0.000
SapurV1A.0179s0040 Salix purpurea SapurV1A.0179s0040 I 0.000
SapurV1A.0287s0280 Salix purpurea SapurV1A.0287s0280 I 0.000
SapurV1A.0287s0290 Salix purpurea SapurV1A.0287s0290 I 0.000
SapurV1A.0487s0230 Salix purpurea SapurV1A.0487s0230 I 0.000
SapurV1A.1801s0020 Salix purpurea SapurV1A.1801s0020 I 0.000
SapurV1A.2633s0010 Salix purpurea SapurV1A.2633s0010 I 0.000
SapurV1A.3982s0010 Salix purpurea SapurV1A.3982s0010 I 0.000
Sb01g048730 Sorghum bicolor Sb01g048730 I 0.000
SELMODRAFT_451784 Selaginella moellendorffii SELMODRAFT_451784 I 0.000
SELMODRAFT_57388 Selaginella moellendorffii SELMODRAFT_57388 I 0.000
Si036363m.g Setaria italica Si036363m.g I 0.000
Solyc02g084350.2 Solanum lycopersicum Solyc02g084350.2 I 0.000
Solyc06g065410.2 Solanum lycopersicum Solyc06g065410.2 I 0.000
Solyc08g079120.1 Solanum lycopersicum Solyc08g079120.1 I 0.000
Solyc11g018660.1 Solanum lycopersicum Solyc11g018660.1 I 0.000
TCM_000235 Theobroma cacao TCM_000235 I 0.000
TCM_036364 Theobroma cacao TCM_036364 I 0.000
Thhalv10018853m.g Eutrema salsugineum Thhalv10018853m.g I 0.000
Thhalv10022756m.g Eutrema salsugineum Thhalv10022756m.g I 0.000
Thhalv10025510m.g Eutrema salsugineum Thhalv10025510m.g I 0.000
Traes_4BL_03B8EA3BF Triticum aestivum Traes_4BL_03B8EA3BF I 0.000
Traes_4DL_54E14ABCB Triticum aestivum Traes_4DL_54E14ABCB I 0.000
VND1 Arabidopsis lyrata Al_scaffold_0003_3772 I 0.000
VND7 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2001196 I 0.000
VND7 Vitis vinifera VIT_18s0072g01060 I 0.000