CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORUFI07G27440
(
Oryza rufipogon
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
ORUFI07G27440
T354132_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY46
M07395_2.00
Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY46_col_a
0.812
0.593
WRKY46
M07396_2.00
Arabidopsis thaliana
HRAAGTCAACG
CGTTGACTTYD
Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a
0.812
0.593
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORUFI07G27440.1
WRKY
123
184
EDGRQWRKYGQKHIQDSPNNPRSYYRCTHRPDQGCMATKQVQTSESNSSEFVISYYGEHTCR
Links
Other
WRKY
family TFs
Other
Oryza rufipogon
TFs
156 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava32886.m1
Manihot esculenta
cassava32886.m1
I
0.000
cassava9378.m1
Manihot esculenta
cassava9378.m1
I
0.000
Ciclev10024246m.g
Citrus clementina
Ciclev10024246m.g
I
0.000
Eucgr.B00699
Eucalyptus grandis
Eucgr.B00699
I
0.000
orange1.1g035911m.g
Citrus sinensis
orange1.1g035911m.g
I
0.000
POPTR_0015s03140
Populus trichocarpa
POPTR_0015s03140
I
0.000
TCM_012252
Theobroma cacao
TCM_012252
I
0.000