CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRUPE_ppa020736mg
(
Prunus persica
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
PRUPE_ppa020736mg
T354473_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY70
M07399_2.00
Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY70_col
0.819
0.610
WRKY46
M07395_2.00
Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY46_col_a
0.814
0.610
WRKY46
M07396_2.00
Arabidopsis thaliana
HRAAGTCAACG
CGTTGACTTYD
Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a
0.814
0.610
WRKY38
M00901_2.00
Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY38
0.810
0.559
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ08837
WRKY
151
211
DDGHGWRKYGQKRILNSKHSRNYYRCTHKFEQSCKATKYVQQIQDHPPMFRTTYHGNHTCR
Links
Other
WRKY
family TFs
Other
Prunus persica
TFs
222 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_kg.3__1623__AT3G14980.1
Arabidopsis lyrata
fgenesh2_kg.3__1623__AT3G14980.1
N
0.000
IDM1
Arabidopsis thaliana
AT3G14980
N
0.000