CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRIUR3_04352
(
Triticum urartu
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
TRIUR3_04352
T355065_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY46
M07395_2.00
Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY46_col_a
0.823
0.610
WRKY46
M07396_2.00
Arabidopsis thaliana
HRAAGTCAACG
CGTTGACTTYD
Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a
0.823
0.610
WRKY70
M07399_2.00
Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY70_col
0.808
0.593
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRIUR3_04352-P1
WRKY
115
175
DDGQAWRKYGQKEIHNSKHSRAYFRCTHKYDQLCAAQRQVQRCDDDEGMFRVTYIGVHTCR
Links
Other
WRKY
family TFs
Other
Triticum urartu
TFs
96 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pg.scaffold_30000177
Physcomitrella patens
fgenesh1_pg.scaffold_30000177
N
0.000
fgenesh1_pm.scaffold_257000017
Physcomitrella patens
fgenesh1_pm.scaffold_257000017
N
0.000
gene03778-v1.0-hybrid
Fragaria vesca
gene03778-v1.0-hybrid
N
0.000
GRMZM2G133331
Zea mays
GRMZM2G133331
N
0.000
Lus10019543.g
Linum usitatissimum
Lus10019543.g
N
0.000
Lus10043387.g
Linum usitatissimum
Lus10043387.g
N
0.000
Sb10g009592
Sorghum bicolor
Sb10g009592
N
0.000
SELMODRAFT_231160
Selaginella moellendorffii
SELMODRAFT_231160
N
0.000